Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU6-1286P-201ENST00000383871 107 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 RNU6-1074P-201ENST00000383995 104 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 RNU6-131P-201ENST00000391144 107 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 RNA5SP317-201ENST00000410176 116 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 RNA5SP311-201ENST00000411290 116 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 AL356867.1-201ENST00000429623 299 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.01□□□□□ -1.45
PRIM1P49642 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC6.01□□□□□ -1.45
PRIM1P49642 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.01□□□□□ -1.45
PRIM1P49642 RNA5SP103-201ENST00000459503 118 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 RNA5SP315-201ENST00000516340 116 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 SCARNA15.2-201ENST00000516409 127 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 RNA5SP312-201ENST00000517068 116 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 AP003730.1-201ENST00000524605 285 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC6.01□□□□□ -1.45
PRIM1P49642 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC6.01□□□□□ -1.45
PRIM1P49642 AC016256.1-201ENST00000547971 354 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 MIR3684-201ENST00000579779 74 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 RN7SL176P-201ENST00000580352 264 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
PRIM1P49642 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
PRIM1P49642 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PRIM1P49642 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PRIM1P49642 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PRIM1P49642 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PRIM1P49642 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.01□□□□□ -1.45
PRIM1P49642 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PRIM1P49642 Y_RNA.23-201ENST00000362496 106 ntBASIC6□□□□□ -1.45
PRIM1P49642 RNU6-626P-201ENST00000363354 107 ntBASIC6□□□□□ -1.45
PRIM1P49642 Y_RNA.215-201ENST00000364204 112 ntBASIC6□□□□□ -1.45
PRIM1P49642 RNU6-356P-201ENST00000384140 107 ntBASIC6□□□□□ -1.45
PRIM1P49642 RNU6-541P-201ENST00000384709 110 ntBASIC6□□□□□ -1.45
PRIM1P49642 Z98745.1-201ENST00000402553 494 ntBASIC6□□□□□ -1.45
PRIM1P49642 AL357139.1-201ENST00000407792 426 ntBASIC6□□□□□ -1.45
PRIM1P49642 MIR1271-201ENST00000408537 86 ntBASIC6□□□□□ -1.45
PRIM1P49642 MIR1290-201ENST00000408735 78 ntBASIC6□□□□□ -1.45
PRIM1P49642 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC6□□□□□ -1.45
PRIM1P49642 AL078601.1-201ENST00000444542 271 ntBASIC6□□□□□ -1.45
PRIM1P49642 PHBP16-201ENST00000446318 950 ntBASIC6□□□□□ -1.45
PRIM1P49642 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6□□□□□ -1.45
PRIM1P49642 RN7SL98P-201ENST00000462271 300 ntBASIC6□□□□□ -1.45
PRIM1P49642 UQCRHP4-201ENST00000471686 272 ntBASIC6□□□□□ -1.45
PRIM1P49642 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC6□□□□□ -1.45
PRIM1P49642 BPIFA4P-203ENST00000603168 689 ntBASIC6□□□□□ -1.45
PRIM1P49642 AL365222.1-201ENST00000614661 98 ntBASIC6□□□□□ -1.45
PRIM1P49642 AC090617.7-201ENST00000623952 126 ntBASIC6□□□□□ -1.45
PRIM1P49642 MIR3653-201ENST00000625572 110 ntBASIC6□□□□□ -1.45
PRIM1P49642 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC6□□□□□ -1.45
PRIM1P49642 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PRIM1P49642 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
PRIM1P49642 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PRIM1P49642 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PRIM1P49642 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6□□□□□ -1.45
PRIM1P49642 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PRIM1P49642 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PRIM1P49642 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PRIM1P49642 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.99□□□□□ -1.45
PRIM1P49642 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.99□□□□□ -1.45
PRIM1P49642 RNU1-94P-201ENST00000362627 173 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RNA5SP197-201ENST00000363357 119 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RN7SKP224-201ENST00000364140 325 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RNA5SP205-201ENST00000364653 136 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RNA5SP366-201ENST00000365454 123 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RNU1-13P-201ENST00000384499 162 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 MIR32-201ENST00000384965 70 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RNA5SP213-201ENST00000391031 106 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 CKS1BP5-201ENST00000434172 273 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RPL35AP21-201ENST00000437667 333 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RPL23AP93-201ENST00000440847 484 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 RPL26P26-201ENST00000480251 434 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 SNORA31.19-201ENST00000517079 126 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 MIR3921-201ENST00000577308 85 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.99□□□□□ -1.45
PRIM1P49642 AC006130.2-201ENST00000586202 326 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 AL591034.3-201ENST00000605511 685 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 AC126323.6-202ENST00000568092 3511 ntBASIC5.99□□□□□ -1.45
PRIM1P49642 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PRIM1P49642 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.99□□□□□ -1.45
PRIM1P49642 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PRIM1P49642 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PRIM1P49642 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PRIM1P49642 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PRIM1P49642 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PRIM1P49642 SMG1P4-204ENST00000523028 4131 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PRIM1P49642 RNU6-215P-201ENST00000365169 102 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 RNU6-1175P-201ENST00000365200 107 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 RNU6-1130P-201ENST00000365434 107 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 Y_RNA.353-201ENST00000365440 108 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 RNU6-658P-201ENST00000384606 106 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 Y_RNA.571-201ENST00000384753 98 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 AC011742.1-201ENST00000431448 434 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.98□□□□□ -1.45
PRIM1P49642 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.98□□□□□ -1.45
PRIM1P49642 AP000870.1-201ENST00000472927 406 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 AL049874.1-201ENST00000489560 388 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.98□□□□□ -1.45
PRIM1P49642 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.98□□□□□ -1.45
PRIM1P49642 RNA5SP291-201ENST00000517222 105 ntBASIC5.98□□□□□ -1.45
PRIM1P49642 AL138963.2-201ENST00000605137 226 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms