Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.96□□□□□ -2.1
CSNK1A1P48729 NEFMP1-201ENST00000443423 1006 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.96□□□□□ -2.1
CSNK1A1P48729 HMGN2P10-201ENST00000448085 265 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 KLF3P2-201ENST00000465138 268 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 UBE2DNL-203ENST00000474922 222 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.96□□□□□ -2.1
CSNK1A1P48729 AF131216.2-201ENST00000512316 564 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 RNA5SP112-201ENST00000515937 99 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 PCMTD1P2-201ENST00000565017 355 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.96□□□□□ -2.1
CSNK1A1P48729 AC005261.5-201ENST00000596280 355 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 AL353778.1-201ENST00000603149 408 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 AC006338.1-201ENST00000618453 749 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.96□□□□□ -2.1
CSNK1A1P48729 AC092104.1-201ENST00000497346 1441 ntBASIC1.96□□□□□ -2.1
CSNK1A1P48729 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.96□□□□□ -2.1
CSNK1A1P48729 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSNK1A1P48729 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.96□□□□□ -2.1
CSNK1A1P48729 AL359854.1-201ENST00000614203 1594 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSNK1A1P48729 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSNK1A1P48729 MIR449A-201ENST00000362113 91 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 SMIM11P1-201ENST00000369586 178 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 RNU6-533P-201ENST00000384144 107 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 MTCYBP36-201ENST00000404146 440 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 RNU2-62P-201ENST00000410868 191 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 NPM1P11-201ENST00000417106 855 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 RAC1P6-201ENST00000423911 575 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 RPL30P4-201ENST00000429309 333 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CSNK1A1P48729 RPL22P17-201ENST00000438729 315 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.95□□□□□ -2.1
CSNK1A1P48729 EPS15P1-201ENST00000448836 336 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.95□□□□□ -2.1
CSNK1A1P48729 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.95□□□□□ -2.1
CSNK1A1P48729 RPL37P6-201ENST00000460682 294 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC004263.1-201ENST00000479327 332 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.95□□□□□ -2.1
CSNK1A1P48729 RPL39P36-201ENST00000490784 156 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 MTCYBP35-201ENST00000503630 1137 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 RNA5SP200-201ENST00000516360 103 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.95□□□□□ -2.1
CSNK1A1P48729 CYCSP26-201ENST00000534107 320 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AP002770.2-201ENST00000543613 532 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC009063.1-201ENST00000563342 702 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AL138976.2-201ENST00000563989 694 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC012435.1-202ENST00000568772 240 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 MTATP6P24-201ENST00000576835 677 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 MIR5697-201ENST00000578045 78 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 LRRC37A5P-203ENST00000580181 585 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 MIR4765-201ENST00000585007 77 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC078899.2-201ENST00000595282 212 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC107294.1-201ENST00000609524 467 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC011939.3-201ENST00000613686 466 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC024581.2-201ENST00000619986 252 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AL031601.2-202ENST00000622650 282 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 AC010149.2-201ENST00000637608 315 ntBASIC1.95□□□□□ -2.1
CSNK1A1P48729 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSNK1A1P48729 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSNK1A1P48729 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 RNU6-288P-201ENST00000363690 104 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 RNA5SP125-201ENST00000364843 120 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 RNU5E-6P-201ENST00000365574 115 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 MIR218-1-201ENST00000384999 110 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 RPS12P24-201ENST00000412619 387 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 AL353729.1-201ENST00000425044 720 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 HMGB1P27-201ENST00000431429 603 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 HMGB3P12-201ENST00000438745 556 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 ZNF114P1-201ENST00000453500 292 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 SNORD97-201ENST00000459187 142 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC104435.1-201ENST00000483483 166 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC112204.1-201ENST00000502591 103 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC118465.1-201ENST00000513820 1271 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC006199.1-201ENST00000548728 219 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC021739.1-201ENST00000559631 174 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC121334.2-201ENST00000605387 271 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.94□□□□□ -2.1
CSNK1A1P48729 AL355816.2-201ENST00000610049 647 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC004223.4-201ENST00000612426 332 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC027807.2-201ENST00000616099 408 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 MIR7844-201ENST00000616161 122 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 AC131159.1-201ENST00000621854 213 ntBASIC1.94□□□□□ -2.1
CSNK1A1P48729 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSNK1A1P48729 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms