Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.67□□□□□ -2.14
RPA3P35244 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
RPA3P35244 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.66□□□□□ -2.14
RPA3P35244 RNU6-560P-201ENST00000364007 108 ntBASIC1.66□□□□□ -2.14
RPA3P35244 Y_RNA.311-201ENST00000365068 96 ntBASIC1.66□□□□□ -2.14
RPA3P35244 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RPA3P35244 Y_RNA.472-201ENST00000384322 102 ntBASIC1.66□□□□□ -2.14
RPA3P35244 MIR504-201ENST00000385065 83 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AL512604.1-201ENST00000404812 257 ntBASIC1.66□□□□□ -2.14
RPA3P35244 POLHP1-201ENST00000411806 470 ntBASIC1.66□□□□□ -2.14
RPA3P35244 USP9YP33-201ENST00000412220 421 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.66□□□□□ -2.14
RPA3P35244 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.66□□□□□ -2.14
RPA3P35244 XKRYP1-201ENST00000423438 492 ntBASIC1.66□□□□□ -2.14
RPA3P35244 XKRYP2-201ENST00000432915 492 ntBASIC1.66□□□□□ -2.14
RPA3P35244 USP9YP35-201ENST00000435696 412 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.66□□□□□ -2.14
RPA3P35244 AC005094.1-201ENST00000440420 368 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AC007677.1-201ENST00000445757 515 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.66□□□□□ -2.14
RPA3P35244 RPL23AP3-201ENST00000453844 468 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.66□□□□□ -2.14
RPA3P35244 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RPA3P35244 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.66□□□□□ -2.14
RPA3P35244 SNORA25.15-201ENST00000516487 89 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.66□□□□□ -2.14
RPA3P35244 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.66□□□□□ -2.14
RPA3P35244 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.66□□□□□ -2.14
RPA3P35244 AC022662.1-201ENST00000580252 331 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AC078899.2-201ENST00000595282 212 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AL031274.2-201ENST00000599419 203 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AC025811.1-201ENST00000604312 472 ntBASIC1.66□□□□□ -2.14
RPA3P35244 RNU6-1192P-201ENST00000612197 107 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AC091834.1-201ENST00000614543 472 ntBASIC1.66□□□□□ -2.14
RPA3P35244 RNU6-489P-201ENST00000618289 107 ntBASIC1.66□□□□□ -2.14
RPA3P35244 AL136313.1-201ENST00000624804 202 ntBASIC1.66□□□□□ -2.14
RPA3P35244 MTND5P33-201ENST00000571250 1450 ntBASIC1.66□□□□□ -2.14
RPA3P35244 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPA3P35244 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RPA3P35244 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.65□□□□□ -2.14
RPA3P35244 RNU6-188P-201ENST00000364207 107 ntBASIC1.65□□□□□ -2.15
RPA3P35244 RNU6-621P-201ENST00000364752 109 ntBASIC1.65□□□□□ -2.15
RPA3P35244 U3.13-201ENST00000364804 214 ntBASIC1.65□□□□□ -2.15
RPA3P35244 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
RPA3P35244 MTCO1P17-201ENST00000411522 491 ntBASIC1.65□□□□□ -2.15
RPA3P35244 RPS20P15-201ENST00000412792 311 ntBASIC1.65□□□□□ -2.15
RPA3P35244 IFNA20P-201ENST00000436840 528 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AL161788.1-201ENST00000441805 169 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.65□□□□□ -2.15
RPA3P35244 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.65□□□□□ -2.15
RPA3P35244 RNU7-59P-201ENST00000459101 61 ntBASIC1.65□□□□□ -2.15
RPA3P35244 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.65□□□□□ -2.15
RPA3P35244 RPF2P2-201ENST00000504693 896 ntBASIC1.65□□□□□ -2.15
RPA3P35244 FAM92A1P2-202ENST00000504766 877 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AC021146.8-201ENST00000507455 733 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.65□□□□□ -2.15
RPA3P35244 SNORA31.3-201ENST00000516029 96 ntBASIC1.65□□□□□ -2.15
RPA3P35244 RNA5SP137-201ENST00000516833 135 ntBASIC1.65□□□□□ -2.15
RPA3P35244 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
RPA3P35244 ACA59.2-201ENST00000517061 156 ntBASIC1.65□□□□□ -2.15
RPA3P35244 RNU6-64P-201ENST00000517119 105 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AC092451.2-201ENST00000538746 658 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RPA3P35244 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.65□□□□□ -2.15
RPA3P35244 MIR4299-201ENST00000577899 72 ntBASIC1.65□□□□□ -2.15
RPA3P35244 MIR502-201ENST00000606349 86 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AC092574.1-201ENST00000609771 420 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AC107308.1-201ENST00000615897 301 ntBASIC1.65□□□□□ -2.15
RPA3P35244 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.65□□□□□ -2.15
RPA3P35244 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.65□□□□□ -2.15
RPA3P35244 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RPA3P35244 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.15
RPA3P35244 RNA5SP240-201ENST00000365355 128 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AL627390.1-201ENST00000396055 340 ntBASIC1.64□□□□□ -2.15
RPA3P35244 NDUFS5P1-201ENST00000405668 289 ntBASIC1.64□□□□□ -2.15
RPA3P35244 MIR320C1-201ENST00000408566 88 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AL359704.1-201ENST00000411586 781 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA3P35244 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.64□□□□□ -2.15
RPA3P35244 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
RPA3P35244 RPS15AP9-201ENST00000439856 381 ntBASIC1.64□□□□□ -2.15
RPA3P35244 MTCO1P27-201ENST00000448269 226 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA3P35244 AL441985.1-201ENST00000457727 251 ntBASIC1.64□□□□□ -2.15
RPA3P35244 CYP2C59P-201ENST00000457790 269 ntBASIC1.64□□□□□ -2.15
RPA3P35244 RPL7P18-201ENST00000478965 734 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC018437.1-201ENST00000492214 406 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.64□□□□□ -2.15
RPA3P35244 AC116655.1-201ENST00000508324 901 ntBASIC1.64□□□□□ -2.15
RPA3P35244 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA3P35244 MRPS17P9-201ENST00000511924 393 ntBASIC1.64□□□□□ -2.15
RPA3P35244 SNORA19.3-201ENST00000516165 130 ntBASIC1.64□□□□□ -2.15
RPA3P35244 RNU6-548P-201ENST00000517083 115 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA3P35244 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.64□□□□□ -2.15
RPA3P35244 EEF1A1P37-201ENST00000522748 715 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA3P35244 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA3P35244 AC079598.5-201ENST00000547460 117 ntBASIC1.64□□□□□ -2.15
RPA3P35244 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms