Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR634-201ENST00000385208 97 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 Y_RNA.579-201ENST00000390939 94 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 RNU6-293P-201ENST00000411259 106 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AC017079.2-201ENST00000416102 485 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AL353729.1-201ENST00000425044 720 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 SKA2P1-201ENST00000425592 390 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC6A4P31645 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC6A4P31645 AC009237.8-201ENST00000445492 379 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 FABP5P15-201ENST00000453566 214 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC6A4P31645 Y_RNA.639-201ENST00000458981 102 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 RN7SL293P-201ENST00000481765 281 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC6A4P31645 SUMO2P6-201ENST00000505273 288 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC6A4P31645 AC009901.1-201ENST00000506703 541 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC6A4P31645 RN7SKP83-201ENST00000516512 178 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 RNU6-1332P-201ENST00000516666 104 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 RNA5SP290-201ENST00000517133 127 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC6A4P31645 AP003122.3-201ENST00000526316 255 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AC084851.1-201ENST00000529105 249 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 APOOP3-201ENST00000536787 586 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AC007458.1-201ENST00000542812 373 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AL163153.1-201ENST00000554223 283 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AL670379.10-201ENST00000604330 253 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AC110741.2-201ENST00000605278 268 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AL670379.9-201ENST00000605428 253 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AC002044.1-201ENST00000606707 158 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AL355365.1-201ENST00000616480 294 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 AL359757.2-201ENST00000624309 274 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 MTND4LP32-201ENST00000636111 270 ntBASIC3.68□□□□□ -1.82
SLC6A4P31645 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC6A4P31645 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SLC6A4P31645 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC6A4P31645 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC6A4P31645 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC6A4P31645 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC6A4P31645 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 AC006504.1-201ENST00000562493 3666 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AC073073.2-201ENST00000609827 2578 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 MTND4P27-201ENST00000450813 1354 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.67□□□□□ -1.82
SLC6A4P31645 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 RNU6-50P-201ENST00000362356 103 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 Y_RNA.394-201ENST00000383942 103 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 RNU6-692P-201ENST00000384496 107 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 MIR490-201ENST00000384865 128 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 MIR183-201ENST00000384958 110 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 RNU4-14P-201ENST00000410858 122 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.67□□□□□ -1.82
SLC6A4P31645 AL158156.1-201ENST00000422509 473 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 UBE2V1P4-201ENST00000425374 344 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC6A4P31645 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC6A4P31645 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC6A4P31645 Y_RNA.653-201ENST00000459091 95 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AC130509.1-201ENST00000464158 433 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AC087884.1-201ENST00000469738 328 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.67□□□□□ -1.82
SLC6A4P31645 RNU6-1016P-201ENST00000516689 94 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 RNA5SP468-201ENST00000516782 93 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC6A4P31645 AP003072.1-201ENST00000531740 145 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC6A4P31645 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC6A4P31645 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC6A4P31645 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC6A4P31645 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC6A4P31645 AC080078.3-201ENST00000605407 463 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AL627309.6-201ENST00000606857 840 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 RMST_4.1-201ENST00000616886 107 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AC098657.3-201ENST00000620434 263 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC6A4P31645 U6.105-201ENST00000637379 88 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 AL732372.2-225ENST00000642124 456 ntBASIC3.67□□□□□ -1.82
SLC6A4P31645 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC6A4P31645 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC6A4P31645 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC6A4P31645 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A4P31645 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A4P31645 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A4P31645 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A4P31645 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A4P31645 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A4P31645 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A4P31645 MIR412-201ENST00000362142 91 ntBASIC3.66□□□□□ -1.82
SLC6A4P31645 Y_RNA.146-201ENST00000363549 102 ntBASIC3.66□□□□□ -1.82
SLC6A4P31645 Y_RNA.187-201ENST00000363918 113 ntBASIC3.66□□□□□ -1.82
SLC6A4P31645 RNA5SP42-201ENST00000364278 115 ntBASIC3.66□□□□□ -1.82
SLC6A4P31645 SNORD42.2-201ENST00000365570 69 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms