Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC000111.3-201ENST00000433478 193 ntBASIC0.67□□□□□ -2.3
CLIP1P30622 AL034418.1-201ENST00000448675 860 ntBASIC0.67□□□□□ -2.3
CLIP1P30622 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.67□□□□□ -2.3
CLIP1P30622 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.67□□□□□ -2.3
CLIP1P30622 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.67□□□□□ -2.3
CLIP1P30622 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.67□□□□□ -2.3
CLIP1P30622 CR381572.1-201ENST00000625098 102 ntBASIC0.67□□□□□ -2.3
CLIP1P30622 Y_RNA.280-201ENST00000364765 112 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 Y_RNA.412-201ENST00000384001 104 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 SNORA50A-201ENST00000384225 134 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 SSR1P1-201ENST00000407630 814 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.66□□□□□ -2.3
CLIP1P30622 CST2P1-201ENST00000425770 87 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.66□□□□□ -2.3
CLIP1P30622 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.66□□□□□ -2.3
CLIP1P30622 HMGB1P36-201ENST00000487709 576 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.66□□□□□ -2.3
CLIP1P30622 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CLIP1P30622 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.66□□□□□ -2.3
CLIP1P30622 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.66□□□□□ -2.3
CLIP1P30622 LINC00557-201ENST00000563184 1279 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 ZNF92P3-201ENST00000596594 954 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 AC068787.1-201ENST00000623908 691 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
CLIP1P30622 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.66□□□□□ -2.3
CLIP1P30622 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
CLIP1P30622 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CLIP1P30622 RNU6-1164P-201ENST00000364428 107 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 RNU6-185P-201ENST00000384421 107 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.65□□□□□ -2.3
CLIP1P30622 RNU6-1004P-201ENST00000516584 111 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 SCARNA3-201ENST00000517097 143 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.65□□□□□ -2.3
CLIP1P30622 AP006587.4-201ENST00000526053 529 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.65□□□□□ -2.3
CLIP1P30622 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.65□□□□□ -2.3
CLIP1P30622 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.65□□□□□ -2.3
CLIP1P30622 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.65□□□□□ -2.3
CLIP1P30622 AL138478.1-201ENST00000612252 832 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 AC022202.1-201ENST00000613515 211 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 AL121890.5-201ENST00000620848 304 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 AC024595.1-201ENST00000623088 387 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 AC068057.2-201ENST00000624047 895 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 MIR6086-201ENST00000638065 55 ntBASIC0.65□□□□□ -2.3
CLIP1P30622 MTATP6P31-201ENST00000406985 692 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 RNU6-712P-201ENST00000410558 100 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC013410.2-201ENST00000422627 201 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 EIF4EP2-201ENST00000422816 654 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CLIP1P30622 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.64□□□□□ -2.31
CLIP1P30622 AC104689.1-201ENST00000473356 768 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.64□□□□□ -2.31
CLIP1P30622 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 RNU4-57P-201ENST00000515980 135 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.64□□□□□ -2.31
CLIP1P30622 OR8K4P-201ENST00000534608 872 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 MIR4504-201ENST00000577413 92 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 MIR4514-201ENST00000581410 57 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC023932.2-201ENST00000603176 175 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 CYP2C61P-201ENST00000604072 290 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC073111.2-201ENST00000605657 1075 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC138473.1-201ENST00000605717 526 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC110792.4-201ENST00000609843 298 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 MIR7157-201ENST00000635801 60 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
CLIP1P30622 MIR218-1-201ENST00000384999 110 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 SNORD65-201ENST00000391079 73 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 RNU6-1197P-201ENST00000391183 107 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.64□□□□□ -2.31
CLIP1P30622 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.64□□□□□ -2.31
CLIP1P30622 YWHAZP8-201ENST00000436935 731 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 RNA5SP57-201ENST00000459463 123 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC147055.4-201ENST00000504399 745 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 RNU6-319P-201ENST00000516025 108 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 RNU6-902P-201ENST00000517212 91 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.64□□□□□ -2.31
CLIP1P30622 AC004923.2-201ENST00000529649 369 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.64□□□□□ -2.31
CLIP1P30622 AC021171.1-201ENST00000603137 706 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AL021997.1-201ENST00000605757 193 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 AC084824.5-201ENST00000612009 413 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 U6.48-201ENST00000618523 106 ntBASIC0.64□□□□□ -2.31
CLIP1P30622 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CLIP1P30622 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CLIP1P30622 RNU1-36P-201ENST00000365130 165 ntBASIC0.63□□□□□ -2.31
CLIP1P30622 RNU6-339P-201ENST00000384310 107 ntBASIC0.63□□□□□ -2.31
CLIP1P30622 PRRC2CP1-201ENST00000404428 159 ntBASIC0.63□□□□□ -2.31
CLIP1P30622 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.63□□□□□ -2.31
CLIP1P30622 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.63□□□□□ -2.31
CLIP1P30622 HMGN2P9-201ENST00000476875 229 ntBASIC0.63□□□□□ -2.31
CLIP1P30622 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.63□□□□□ -2.31
CLIP1P30622 AC134050.1-201ENST00000495088 933 ntBASIC0.63□□□□□ -2.31
CLIP1P30622 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CLIP1P30622 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.63□□□□□ -2.31
CLIP1P30622 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms