Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC092989.1-201ENST00000481235 277 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AL160314.1-201ENST00000490836 438 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 RNA5SP384-201ENST00000516615 116 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 SNORA31.16-201ENST00000516773 139 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 RNU6-528P-201ENST00000516926 100 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A5P29400 AP001189.2-201ENST00000527320 189 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 MIR4637-201ENST00000582405 84 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 uc_338.14-201ENST00000613162 166 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AC008443.7-201ENST00000622195 246 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A5P29400 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
COL4A5P29400 RNU6-28P-201ENST00000362378 107 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 MIR17-201ENST00000385012 84 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
COL4A5P29400 RNU6-754P-201ENST00000391166 107 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 RNU6-1328P-201ENST00000410938 106 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 RPS24P7-201ENST00000416921 246 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 CYCSP48-201ENST00000417124 323 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 Z75741.2-201ENST00000417272 1167 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 MTCYBP32-201ENST00000427945 1084 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A5P29400 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A5P29400 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A5P29400 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A5P29400 MTND2P30-201ENST00000456663 382 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 RPL26P9-201ENST00000457466 433 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 AC010186.2-204ENST00000537668 439 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 AC025165.5-201ENST00000602802 578 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 AC004853.1-201ENST00000604902 698 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 AL583856.2-201ENST00000606298 543 ntBASIC1.28□□□□□ -2.2
COL4A5P29400 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
COL4A5P29400 MTND5P30-201ENST00000452896 1731 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 RNU4-38P-201ENST00000364472 129 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 BX664727.1-201ENST00000416024 466 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 PPP1R11P2-201ENST00000423543 382 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A5P29400 UBE2FP3-201ENST00000436366 524 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.27□□□□□ -2.21
COL4A5P29400 LARP1BP2-201ENST00000486594 519 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 AC104685.1-201ENST00000502445 371 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A5P29400 AC023141.11-201ENST00000508864 202 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 AC105313.1-201ENST00000509121 353 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A5P29400 SNORA48.10-201ENST00000516965 160 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 SNORD19.2-201ENST00000516978 73 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 AP005902.1-201ENST00000521358 186 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A5P29400 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.27□□□□□ -2.21
COL4A5P29400 AL138976.2-201ENST00000563989 694 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 AC112191.3-201ENST00000604371 277 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 AP002791.1-201ENST00000623291 381 ntBASIC1.27□□□□□ -2.21
COL4A5P29400 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
COL4A5P29400 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
COL4A5P29400 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL4A5P29400 Y_RNA.258-201ENST00000364613 105 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 RNU6-657P-201ENST00000383904 107 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 RNU6-220P-201ENST00000390919 107 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 CCNG1P1-201ENST00000406783 885 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A5P29400 RNU2-42P-201ENST00000410697 113 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC096649.2-201ENST00000416186 393 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 MTCYBP38-201ENST00000417160 1123 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A5P29400 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A5P29400 AC092634.2-201ENST00000428146 1010 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.26□□□□□ -2.21
COL4A5P29400 NANOGP2-201ENST00000435391 727 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC016691.1-201ENST00000441321 413 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A5P29400 PSPHP1-201ENST00000450062 261 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AL441985.1-201ENST00000457727 251 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC026410.2-201ENST00000460281 156 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC097493.1-201ENST00000463958 372 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AL049874.1-201ENST00000489560 388 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC105252.1-201ENST00000503089 286 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A5P29400 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.26□□□□□ -2.21
COL4A5P29400 AC036111.3-201ENST00000526389 112 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 CYP3A137P-201ENST00000562436 69 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A5P29400 AL590095.2-201ENST00000604136 117 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC211469.2-201ENST00000605461 205 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A5P29400 AC239868.4-201ENST00000608318 671 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC009268.2-201ENST00000621925 457 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC231657.1-201ENST00000624313 397 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC019226.1-201ENST00000625666 515 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.26□□□□□ -2.21
COL4A5P29400 RNU6-575P-201ENST00000411326 105 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.26□□□□□ -2.21
COL4A5P29400 BPY2DP-201ENST00000422208 265 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A5P29400 GTF2IP20-201ENST00000431663 360 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms