Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.4□□□□□ -1.87
EPHA3P29320 RNA5SP310-201ENST00000459084 116 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 AC021205.2-201ENST00000480069 347 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.4□□□□□ -1.87
EPHA3P29320 RPL7P47-201ENST00000497299 556 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 MTND5P5-201ENST00000503764 376 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 RNU1-61P-201ENST00000516107 151 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 SNORA70.14-201ENST00000516205 110 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 RNU6-1282P-201ENST00000516735 96 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 RNU6-1153P-201ENST00000516760 105 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 SNORA31.19-201ENST00000517079 126 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 AC087854.1-201ENST00000519706 414 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.4□□□□□ -1.87
EPHA3P29320 OR8R1P-201ENST00000543943 764 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 FRG2DP-202ENST00000566967 323 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.4□□□□□ -1.87
EPHA3P29320 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.4□□□□□ -1.87
EPHA3P29320 AC007938.3-201ENST00000604965 623 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 AL353621.2-201ENST00000605340 133 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 RNU6-85P-201ENST00000605989 107 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 AC099506.2-201ENST00000623074 221 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 AC090574.1-201ENST00000623186 233 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHA3P29320 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHA3P29320 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
EPHA3P29320 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
EPHA3P29320 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
EPHA3P29320 AL359693.1-201ENST00000614959 2407 ntBASIC3.4□□□□□ -1.87
EPHA3P29320 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.39□□□□□ -1.87
EPHA3P29320 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.39□□□□□ -1.87
EPHA3P29320 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.39□□□□□ -1.87
EPHA3P29320 MIR412-201ENST00000362142 91 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 RNU6-562P-201ENST00000362731 107 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 RNU4-76P-201ENST00000364509 141 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 AL591034.1-201ENST00000407447 340 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 RNU6-1304P-201ENST00000411374 106 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 AL139396.1-201ENST00000421137 167 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 RPL7P37-201ENST00000425095 738 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 AC018644.1-201ENST00000429934 551 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.39□□□□□ -1.87
EPHA3P29320 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.39□□□□□ -1.87
EPHA3P29320 HMGN2P7-201ENST00000456186 273 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 Y_RNA.635-201ENST00000459041 101 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
EPHA3P29320 AC011005.2-201ENST00000487324 359 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 RPS27P27-201ENST00000498779 255 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 HMGN1P13-201ENST00000505795 138 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 RPL39P5-202ENST00000512505 151 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 RNU6-559P-201ENST00000516151 98 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 RNU6-572P-201ENST00000516724 80 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 AC007991.1-201ENST00000522680 631 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 HMGB1P14-201ENST00000557424 591 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.39□□□□□ -1.87
EPHA3P29320 AC007151.1-201ENST00000572774 483 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 RMST_4.1-201ENST00000616886 107 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 MIR6875-201ENST00000617506 72 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.39□□□□□ -1.87
EPHA3P29320 AP003355.3-201ENST00000623465 114 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.39□□□□□ -1.87
EPHA3P29320 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
EPHA3P29320 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.39□□□□□ -1.87
EPHA3P29320 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EPHA3P29320 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.39□□□□□ -1.87
EPHA3P29320 AC090740.1-201ENST00000623193 2262 ntBASIC3.39□□□□□ -1.87
EPHA3P29320 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
EPHA3P29320 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
EPHA3P29320 FRG1CP-201ENST00000358464 769 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 RN7SKP280-201ENST00000364196 304 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
EPHA3P29320 RNU6-128P-201ENST00000383976 107 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 RNU6-217P-201ENST00000384164 104 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 Y_RNA.460-201ENST00000384255 102 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 SNORD73A-201ENST00000386062 65 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 FAT1P1-201ENST00000406588 507 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 RN7SKP158-201ENST00000410453 326 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 RNA5SP293-201ENST00000410527 113 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 RPL37P10-201ENST00000412884 288 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 AC093578.1-201ENST00000415219 368 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 PGBD4P6-201ENST00000421501 610 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 RPL23AP82-202ENST00000427528 469 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 AL359672.1-201ENST00000442302 409 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.38□□□□□ -1.87
EPHA3P29320 MTND1P17-201ENST00000448961 204 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.38□□□□□ -1.87
EPHA3P29320 RNU7-138P-201ENST00000459479 64 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 CENPBD1P1-201ENST00000464061 469 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 AC069113.1-201ENST00000517763 267 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.38□□□□□ -1.87
EPHA3P29320 AP005597.4-201ENST00000526762 229 ntBASIC3.38□□□□□ -1.87
EPHA3P29320 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.38□□□□□ -1.87
EPHA3P29320 MIR4286-201ENST00000580651 93 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms