Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FCF1P4-201ENST00000448326 183 ntBASIC4.97□□□□□ -1.61
RXRBP28702 RN7SL432P-201ENST00000484057 298 ntBASIC4.97□□□□□ -1.61
RXRBP28702 AC093852.1-201ENST00000503587 266 ntBASIC4.97□□□□□ -1.61
RXRBP28702 AC012433.1-201ENST00000588916 398 ntBASIC4.97□□□□□ -1.61
RXRBP28702 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.97□□□□□ -1.61
RXRBP28702 AC025588.3-201ENST00000604182 274 ntBASIC4.97□□□□□ -1.61
RXRBP28702 BMS1P21-201ENST00000634565 365 ntBASIC4.97□□□□□ -1.61
RXRBP28702 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.97□□□□□ -1.61
RXRBP28702 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RXRBP28702 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RXRBP28702 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.97□□□□□ -1.61
RXRBP28702 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RXRBP28702 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.96□□□□□ -1.61
RXRBP28702 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
RXRBP28702 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.96□□□□□ -1.61
RXRBP28702 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.96□□□□□ -1.62
RXRBP28702 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RXRBP28702 OR56A5-201ENST00000340110 738 ntBASIC4.96□□□□□ -1.62
RXRBP28702 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RXRBP28702 Y_RNA.462-201ENST00000384268 102 ntBASIC4.96□□□□□ -1.62
RXRBP28702 MIR199A2-201ENST00000385289 110 ntBASIC4.96□□□□□ -1.62
RXRBP28702 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RXRBP28702 AL645568.3-201ENST00000433683 316 ntBASIC4.96□□□□□ -1.62
RXRBP28702 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.96□□□□□ -1.62
RXRBP28702 AC084198.1-201ENST00000477747 402 ntBASIC4.96□□□□□ -1.62
RXRBP28702 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.96□□□□□ -1.62
RXRBP28702 SNORD116-26-201ENST00000516006 96 ntBASIC4.96□□□□□ -1.62
RXRBP28702 RNU6-27P-201ENST00000516146 107 ntBASIC4.96□□□□□ -1.62
RXRBP28702 AC022790.1-201ENST00000522872 204 ntBASIC4.96□□□□□ -1.62
RXRBP28702 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.96□□□□□ -1.62
RXRBP28702 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RXRBP28702 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.96□□□□□ -1.62
RXRBP28702 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.96□□□□□ -1.62
RXRBP28702 RPL21P7-201ENST00000557463 483 ntBASIC4.96□□□□□ -1.62
RXRBP28702 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.96□□□□□ -1.62
RXRBP28702 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.96□□□□□ -1.62
RXRBP28702 MIR3910-1-201ENST00000580936 111 ntBASIC4.96□□□□□ -1.62
RXRBP28702 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.96□□□□□ -1.62
RXRBP28702 HMGN2P28-201ENST00000606102 262 ntBASIC4.96□□□□□ -1.62
RXRBP28702 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.96□□□□□ -1.62
RXRBP28702 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.96□□□□□ -1.62
RXRBP28702 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RXRBP28702 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RXRBP28702 MTND5P6-201ENST00000422338 1798 ntBASIC4.96□□□□□ -1.62
RXRBP28702 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RXRBP28702 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.95□□□□□ -1.62
RXRBP28702 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
RXRBP28702 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RXRBP28702 Y_RNA.151-201ENST00000363566 112 ntBASIC4.95□□□□□ -1.62
RXRBP28702 Y_RNA.551-201ENST00000384661 102 ntBASIC4.95□□□□□ -1.62
RXRBP28702 AL138885.1-201ENST00000405921 675 ntBASIC4.95□□□□□ -1.62
RXRBP28702 RAC1P3-201ENST00000416129 580 ntBASIC4.95□□□□□ -1.62
RXRBP28702 RPL35AP22-201ENST00000436855 335 ntBASIC4.95□□□□□ -1.62
RXRBP28702 AC083863.1-201ENST00000438811 231 ntBASIC4.95□□□□□ -1.62
RXRBP28702 RPS26P2-201ENST00000440331 348 ntBASIC4.95□□□□□ -1.62
RXRBP28702 RPL23AP33-201ENST00000442301 452 ntBASIC4.95□□□□□ -1.62
RXRBP28702 AC087385.1-201ENST00000475062 312 ntBASIC4.95□□□□□ -1.62
RXRBP28702 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.95□□□□□ -1.62
RXRBP28702 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.95□□□□□ -1.62
RXRBP28702 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.95□□□□□ -1.62
RXRBP28702 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.95□□□□□ -1.62
RXRBP28702 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.95□□□□□ -1.62
RXRBP28702 IGKV2D-23-201ENST00000518179 286 ntBASIC4.95□□□□□ -1.62
RXRBP28702 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.95□□□□□ -1.62
RXRBP28702 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.95□□□□□ -1.62
RXRBP28702 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.95□□□□□ -1.62
RXRBP28702 AC068446.3-201ENST00000555285 382 ntBASIC4.95□□□□□ -1.62
RXRBP28702 AC090517.1-201ENST00000569307 266 ntBASIC4.95□□□□□ -1.62
RXRBP28702 AC009779.6-201ENST00000603972 165 ntBASIC4.95□□□□□ -1.62
RXRBP28702 AL589994.2-201ENST00000621124 579 ntBASIC4.95□□□□□ -1.62
RXRBP28702 DDX18P3-201ENST00000404856 2007 ntBASIC4.95□□□□□ -1.62
RXRBP28702 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RXRBP28702 AC090971.4-201ENST00000560291 1800 ntBASIC4.95□□□□□ -1.62
RXRBP28702 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RXRBP28702 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RXRBP28702 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RXRBP28702 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RXRBP28702 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RXRBP28702 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.94□□□□□ -1.62
RXRBP28702 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RXRBP28702 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RXRBP28702 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RXRBP28702 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.94□□□□□ -1.62
RXRBP28702 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RXRBP28702 AC138393.1-203ENST00000327086 343 ntBASIC4.94□□□□□ -1.62
RXRBP28702 Y_RNA.20-201ENST00000362479 113 ntBASIC4.94□□□□□ -1.62
RXRBP28702 RNU6-774P-201ENST00000363238 107 ntBASIC4.94□□□□□ -1.62
RXRBP28702 RNY3P11-201ENST00000364153 102 ntBASIC4.94□□□□□ -1.62
RXRBP28702 Y_RNA.478-201ENST00000384358 107 ntBASIC4.94□□□□□ -1.62
RXRBP28702 Y_RNA.539-201ENST00000384635 107 ntBASIC4.94□□□□□ -1.62
RXRBP28702 MIR517A-201ENST00000385001 87 ntBASIC4.94□□□□□ -1.62
RXRBP28702 RPS4XP7-201ENST00000406274 780 ntBASIC4.94□□□□□ -1.62
RXRBP28702 AL160275.2-201ENST00000412010 394 ntBASIC4.94□□□□□ -1.62
RXRBP28702 RPL21P24-201ENST00000413752 448 ntBASIC4.94□□□□□ -1.62
RXRBP28702 BX276092.3-201ENST00000424182 230 ntBASIC4.94□□□□□ -1.62
RXRBP28702 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.94□□□□□ -1.62
RXRBP28702 AC133473.1-201ENST00000455173 299 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms