Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC024153.1-201ENST00000603103 365 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC092447.9-201ENST00000603395 144 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC024220.1-201ENST00000603675 484 ntBASIC3.66□□□□□ -1.82
CD40P25942 AL138721.1-201ENST00000616756 179 ntBASIC3.66□□□□□ -1.82
CD40P25942 AC112484.5-201ENST00000624189 228 ntBASIC3.66□□□□□ -1.82
CD40P25942 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 AC119674.1-207ENST00000641355 633 ntBASIC3.66□□□□□ -1.82
CD40P25942 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CD40P25942 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
CD40P25942 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CD40P25942 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CD40P25942 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.66□□□□□ -1.82
CD40P25942 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.65□□□□□ -1.82
CD40P25942 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.65□□□□□ -1.82
CD40P25942 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.65□□□□□ -1.82
CD40P25942 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
CD40P25942 RNY1P16-201ENST00000363063 111 ntBASIC3.65□□□□□ -1.83
CD40P25942 Y_RNA.158-201ENST00000363651 101 ntBASIC3.65□□□□□ -1.83
CD40P25942 RNA5SP515-201ENST00000364570 118 ntBASIC3.65□□□□□ -1.83
CD40P25942 RNU1-100P-201ENST00000365255 165 ntBASIC3.65□□□□□ -1.83
CD40P25942 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CD40P25942 RNU1-13P-201ENST00000384499 162 ntBASIC3.65□□□□□ -1.83
CD40P25942 MIR1179-201ENST00000408703 91 ntBASIC3.65□□□□□ -1.83
CD40P25942 RN7SKP167-201ENST00000411047 285 ntBASIC3.65□□□□□ -1.83
CD40P25942 RAB9AP3-201ENST00000412737 573 ntBASIC3.65□□□□□ -1.83
CD40P25942 AC005300.1-201ENST00000428401 373 ntBASIC3.65□□□□□ -1.83
CD40P25942 OR4C10P-201ENST00000434991 931 ntBASIC3.65□□□□□ -1.83
CD40P25942 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.65□□□□□ -1.83
CD40P25942 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.65□□□□□ -1.83
CD40P25942 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.65□□□□□ -1.83
CD40P25942 AC125238.1-201ENST00000448842 249 ntBASIC3.65□□□□□ -1.83
CD40P25942 AL162151.2-201ENST00000448875 158 ntBASIC3.65□□□□□ -1.83
CD40P25942 RAB9AP1-201ENST00000449393 573 ntBASIC3.65□□□□□ -1.83
CD40P25942 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
CD40P25942 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
CD40P25942 RPL32P34-201ENST00000486380 400 ntBASIC3.65□□□□□ -1.83
CD40P25942 AC069499.1-201ENST00000489433 509 ntBASIC3.65□□□□□ -1.83
CD40P25942 RNU6-1046P-201ENST00000516538 107 ntBASIC3.65□□□□□ -1.83
CD40P25942 SNORA31.18-201ENST00000517043 134 ntBASIC3.65□□□□□ -1.83
CD40P25942 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.65□□□□□ -1.83
CD40P25942 NACAP3-201ENST00000552100 481 ntBASIC3.65□□□□□ -1.83
CD40P25942 RN7SL600P-201ENST00000581811 299 ntBASIC3.65□□□□□ -1.83
CD40P25942 HMGN2P15-201ENST00000585707 270 ntBASIC3.65□□□□□ -1.83
CD40P25942 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.65□□□□□ -1.83
CD40P25942 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.65□□□□□ -1.83
CD40P25942 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.65□□□□□ -1.83
CD40P25942 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CD40P25942 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CD40P25942 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CD40P25942 ADAM3A-203ENST00000461344 2157 ntBASIC3.64□□□□□ -1.83
CD40P25942 SPRR2C-201ENST00000290702 219 ntBASIC3.64□□□□□ -1.83
CD40P25942 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CD40P25942 RNU6-227P-201ENST00000362865 103 ntBASIC3.64□□□□□ -1.83
CD40P25942 Y_RNA.314-201ENST00000365114 102 ntBASIC3.64□□□□□ -1.83
CD40P25942 SNORA57.1-201ENST00000391227 145 ntBASIC3.64□□□□□ -1.83
CD40P25942 AP000567.1-201ENST00000406413 156 ntBASIC3.64□□□□□ -1.83
CD40P25942 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.64□□□□□ -1.83
CD40P25942 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.64□□□□□ -1.83
CD40P25942 BPY2DP-201ENST00000422208 265 ntBASIC3.64□□□□□ -1.83
CD40P25942 EIF4EP2-201ENST00000422816 654 ntBASIC3.64□□□□□ -1.83
CD40P25942 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.64□□□□□ -1.83
CD40P25942 AC099799.1-201ENST00000439809 192 ntBASIC3.64□□□□□ -1.83
CD40P25942 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.64□□□□□ -1.83
CD40P25942 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.64□□□□□ -1.83
CD40P25942 ABCF2P2-201ENST00000450549 296 ntBASIC3.64□□□□□ -1.83
CD40P25942 SSXP4-201ENST00000451349 245 ntBASIC3.64□□□□□ -1.83
CD40P25942 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.64□□□□□ -1.83
CD40P25942 RPS29P27-201ENST00000463711 170 ntBASIC3.64□□□□□ -1.83
CD40P25942 AF213884.1-201ENST00000488102 463 ntBASIC3.64□□□□□ -1.83
CD40P25942 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.64□□□□□ -1.83
CD40P25942 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.64□□□□□ -1.83
CD40P25942 RNU6-581P-201ENST00000516214 105 ntBASIC3.64□□□□□ -1.83
CD40P25942 Y_RNA.720-201ENST00000517166 92 ntBASIC3.64□□□□□ -1.83
CD40P25942 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.64□□□□□ -1.83
CD40P25942 AC023442.1-201ENST00000531247 422 ntBASIC3.64□□□□□ -1.83
CD40P25942 AP000867.2-201ENST00000532468 320 ntBASIC3.64□□□□□ -1.83
CD40P25942 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CD40P25942 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.64□□□□□ -1.83
CD40P25942 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.64□□□□□ -1.83
CD40P25942 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.64□□□□□ -1.83
CD40P25942 RNA5SP196-201ENST00000625967 102 ntBASIC3.64□□□□□ -1.83
CD40P25942 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CD40P25942 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CD40P25942 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CD40P25942 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.64□□□□□ -1.83
CD40P25942 MTND5P9-201ENST00000503854 1755 ntBASIC3.63□□□□□ -1.83
CD40P25942 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
CD40P25942 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.63□□□□□ -1.83
CD40P25942 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CD40P25942 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.63□□□□□ -1.83
CD40P25942 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.63□□□□□ -1.83
CD40P25942 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CD40P25942 AC002546.1-201ENST00000588041 2504 ntBASIC3.63□□□□□ -1.83
CD40P25942 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CD40P25942 RNU6-858P-201ENST00000362436 107 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 386.1 ms