Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.74□□□□□ -2.13
COL5A1P20908 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.74□□□□□ -2.13
COL5A1P20908 RNA5SP269-201ENST00000459032 137 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 NDUFB4P2-201ENST00000509515 391 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC079140.3-201ENST00000511111 550 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.74□□□□□ -2.13
COL5A1P20908 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL5A1P20908 AC093677.1-201ENST00000514414 678 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.74□□□□□ -2.13
COL5A1P20908 RNU6-202P-201ENST00000515998 96 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.74□□□□□ -2.13
COL5A1P20908 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.74□□□□□ -2.13
COL5A1P20908 AC245505.1-201ENST00000556398 224 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC012414.6-201ENST00000568241 401 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AL391840.1-201ENST00000571144 367 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 MIR3611-201ENST00000584484 83 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC025165.5-201ENST00000602802 578 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC078795.2-201ENST00000602835 1252 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC015540.1-201ENST00000615828 501 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC124864.2-201ENST00000624736 186 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.74□□□□□ -2.13
COL5A1P20908 AC092192.1-201ENST00000633154 1018 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC016716.1-201ENST00000265882 708 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 RNU6-600P-201ENST00000362524 99 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 RNU6-433P-201ENST00000363216 104 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 SNORD114-26-201ENST00000363543 72 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 Y_RNA.201-201ENST00000364052 96 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 RNU6-1078P-201ENST00000364522 103 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 RNU6-660P-201ENST00000364566 109 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 SNORA51.2-201ENST00000364595 132 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 RNU6-1119P-201ENST00000384349 108 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 MTCYBP36-201ENST00000404146 440 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 Y_RNA.599-201ENST00000410489 109 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 NUP35P2-201ENST00000416748 943 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 RPL7P37-201ENST00000425095 738 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.73□□□□□ -2.13
COL5A1P20908 RABEPKP1-201ENST00000440529 1026 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 MTND6P13-201ENST00000443510 523 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 ZNF114P1-201ENST00000453500 292 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 MTCYBP1-201ENST00000454315 1119 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 AC006390.1-201ENST00000508068 283 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.73□□□□□ -2.13
COL5A1P20908 AC109635.4-202ENST00000531666 412 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 OR6C7P-201ENST00000547875 934 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 MIR3913-1-201ENST00000577744 102 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AL353997.4-201ENST00000586196 166 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 U73023.1-201ENST00000603134 700 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AL596327.1-201ENST00000603629 213 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC091805.2-201ENST00000603848 235 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC092354.1-201ENST00000606057 376 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC012150.2-201ENST00000621300 544 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AL445264.1-201ENST00000621719 171 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AL603839.4-201ENST00000624658 1005 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL5A1P20908 AL022578.1-201ENST00000439330 1433 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.73□□□□□ -2.13
COL5A1P20908 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL5A1P20908 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 RNU5F-7P-201ENST00000363696 115 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 RNU4-75P-201ENST00000364621 146 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 SNORD82-201ENST00000365530 70 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 SNRPEP2-201ENST00000397592 279 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 DEFB108C-201ENST00000400154 252 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 AL589823.1-201ENST00000429577 183 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 ARPC3P1-201ENST00000437218 533 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 AC002381.1-201ENST00000447049 280 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.73□□□□□ -2.13
COL5A1P20908 MTND1P27-201ENST00000451117 902 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.73□□□□□ -2.13
COL5A1P20908 LARP1BP2-201ENST00000486594 519 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 TMEM251P1-201ENST00000503717 318 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC022447.3-201ENST00000506865 495 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 HMGB1P28-201ENST00000507778 552 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 RNU6-720P-201ENST00000516363 108 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 RNU6-314P-201ENST00000516574 104 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.73□□□□□ -2.13
COL5A1P20908 CR383656.7-201ENST00000548164 174 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 LSM6P2-201ENST00000552208 177 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 PSMA3P-201ENST00000555485 635 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 MIR4504-201ENST00000577413 92 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms