Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC3P19447 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC3P19447 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC3P19447 HIGD1AP2-201ENST00000446367 280 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 AL358232.1-201ENST00000448030 501 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 ELOCP24-201ENST00000456370 334 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 U8.21-201ENST00000459536 136 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC3P19447 AC006499.6-201ENST00000511169 607 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.76□□□□□ -1.65
ERCC3P19447 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC3P19447 AC010186.2-204ENST00000537668 439 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC3P19447 MIR5685-201ENST00000579080 79 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 AC078795.3-201ENST00000602913 472 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 HSPE1P7-201ENST00000604681 321 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 AL591516.1-201ENST00000611326 274 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ERCC3P19447 AC039056.2-201ENST00000622261 511 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC3P19447 SRP72P2-201ENST00000344851 1979 ntBASIC4.76□□□□□ -1.65
ERCC3P19447 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC3P19447 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC3P19447 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC3P19447 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ERCC3P19447 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ERCC3P19447 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
ERCC3P19447 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC3P19447 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC3P19447 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.75□□□□□ -1.65
ERCC3P19447 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.75□□□□□ -1.65
ERCC3P19447 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.75□□□□□ -1.65
ERCC3P19447 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC3P19447 AC016588.2-201ENST00000632484 3021 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 RNU6-527P-201ENST00000363425 104 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 Y_RNA.197-201ENST00000364004 102 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 SNORD42.2-201ENST00000365570 69 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 RNU6-308P-201ENST00000390957 107 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 AL513475.1-201ENST00000406602 315 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 U3.37-201ENST00000408528 213 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 AL159987.2-201ENST00000432754 307 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC3P19447 SNORD5.1-201ENST00000458800 75 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 RPL23AP49-201ENST00000492925 468 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 Y_RNA.661-201ENST00000516003 99 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 SCARNA16.2-201ENST00000516520 172 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 HIGD1AP1-201ENST00000550979 275 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 AC020661.2-201ENST00000560114 134 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 AC120057.2-201ENST00000571520 271 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 AC011494.1-201ENST00000596454 237 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 AC244505.7-201ENST00000599675 272 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.75□□□□□ -1.65
ERCC3P19447 SCARNA4-202ENST00000625402 129 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 U6.98-201ENST00000637157 84 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
ERCC3P19447 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC3P19447 AP001486.2-201ENST00000561652 5113 ntBASIC4.75□□□□□ -1.65
ERCC3P19447 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.74□□□□□ -1.65
ERCC3P19447 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
ERCC3P19447 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.74□□□□□ -1.65
ERCC3P19447 AC007823.1-201ENST00000569932 1566 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC3P19447 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ERCC3P19447 ADAM3A-203ENST00000461344 2157 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.74□□□□□ -1.65
ERCC3P19447 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC3P19447 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC3P19447 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ERCC3P19447 RNU6-858P-201ENST00000362436 107 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 RNU6-270P-201ENST00000364131 105 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 Y_RNA.216-201ENST00000364205 93 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 Y_RNA.326-201ENST00000365176 113 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 AP000567.1-201ENST00000406413 156 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 RNA5SP31-201ENST00000411144 127 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 NDUFS5P4-201ENST00000412983 318 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ERCC3P19447 USMG5P1-201ENST00000425964 177 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 AC006011.1-201ENST00000442758 349 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.74□□□□□ -1.65
ERCC3P19447 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.74□□□□□ -1.65
ERCC3P19447 AC090096.1-201ENST00000489168 390 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.74□□□□□ -1.65
ERCC3P19447 RNU6-307P-201ENST00000516743 106 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 AMZ2P1-203ENST00000565833 850 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.74□□□□□ -1.65
ERCC3P19447 MIR6075-201ENST00000620782 95 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 U2.21-201ENST00000637295 81 ntBASIC4.74□□□□□ -1.65
ERCC3P19447 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.73□□□□□ -1.65
ERCC3P19447 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC3P19447 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.73□□□□□ -1.65
ERCC3P19447 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.73□□□□□ -1.65
ERCC3P19447 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC3P19447 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.73□□□□□ -1.65
ERCC3P19447 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC3P19447 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ERCC3P19447 RNU1-15P-201ENST00000353977 144 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 Y_RNA.162-201ENST00000363683 102 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms