Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.06□□□□□ -2.4
VCANP13611 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.06□□□□□ -2.4
VCANP13611 AL157871.3-201ENST00000557231 293 ntBASIC0.06□□□□□ -2.4
VCANP13611 AL355297.3-201ENST00000604082 446 ntBASIC0.06□□□□□ -2.4
VCANP13611 RNU1-36P-201ENST00000365130 165 ntBASIC0.06□□□□□ -2.4
VCANP13611 RNU6-1072P-201ENST00000384703 107 ntBASIC0.06□□□□□ -2.4
VCANP13611 RNU6-443P-201ENST00000384780 107 ntBASIC0.06□□□□□ -2.4
VCANP13611 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.06□□□□□ -2.4
VCANP13611 CENPUP1-201ENST00000526649 1202 ntBASIC0.06□□□□□ -2.4
VCANP13611 FAM60BP-201ENST00000578364 658 ntBASIC0.06□□□□□ -2.4
VCANP13611 MIR8065-201ENST00000620577 100 ntBASIC0.06□□□□□ -2.4
VCANP13611 AC073308.1-201ENST00000623696 305 ntBASIC0.06□□□□□ -2.4
VCANP13611 AC091925.2-201ENST00000625059 256 ntBASIC0.06□□□□□ -2.4
VCANP13611 ZNF519P1-201ENST00000449011 1626 ntBASIC0.06□□□□□ -2.4
VCANP13611 AC073349.3-201ENST00000617616 186 ntBASIC0.06□□□□□ -2.4
VCANP13611 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.06□□□□□ -2.4
VCANP13611 RNA5SP189-201ENST00000364920 115 ntBASIC0.05□□□□□ -2.4
VCANP13611 AC069277.2-201ENST00000454211 432 ntBASIC0.05□□□□□ -2.4
VCANP13611 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
VCANP13611 CABYRP1-201ENST00000465493 1045 ntBASIC0.05□□□□□ -2.4
VCANP13611 RN7SKP287-201ENST00000516546 266 ntBASIC0.05□□□□□ -2.4
VCANP13611 MIR5093-201ENST00000583199 100 ntBASIC0.05□□□□□ -2.4
VCANP13611 AL162730.1-201ENST00000605734 292 ntBASIC0.05□□□□□ -2.4
VCANP13611 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.05□□□□□ -2.4
VCANP13611 Y_RNA.204-201ENST00000364112 102 ntBASIC0.05□□□□□ -2.4
VCANP13611 CYP2C59P-201ENST00000457790 269 ntBASIC0.05□□□□□ -2.4
VCANP13611 RNU6-138P-201ENST00000515952 107 ntBASIC0.05□□□□□ -2.4
VCANP13611 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.05□□□□□ -2.4
VCANP13611 HMGB1P14-201ENST00000557424 591 ntBASIC0.05□□□□□ -2.4
VCANP13611 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.05□□□□□ -2.4
VCANP13611 AL355812.1-201ENST00000603215 216 ntBASIC0.05□□□□□ -2.4
VCANP13611 AC090116.1-201ENST00000615679 446 ntBASIC0.05□□□□□ -2.4
VCANP13611 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.04□□□□□ -2.4
VCANP13611 RNU6-775P-201ENST00000459318 96 ntBASIC0.04□□□□□ -2.4
VCANP13611 AC055731.1-201ENST00000474387 401 ntBASIC0.04□□□□□ -2.4
VCANP13611 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.04□□□□□ -2.4
VCANP13611 AC079140.2-201ENST00000506193 142 ntBASIC0.04□□□□□ -2.4
VCANP13611 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.04□□□□□ -2.4
VCANP13611 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.04□□□□□ -2.4
VCANP13611 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.04□□□□□ -2.4
VCANP13611 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
VCANP13611 SNORA25.3-201ENST00000363205 127 ntBASIC0.03□□□□□ -2.4
VCANP13611 RNU6-674P-201ENST00000363831 107 ntBASIC0.03□□□□□ -2.4
VCANP13611 RPL21P47-201ENST00000483696 477 ntBASIC0.03□□□□□ -2.4
VCANP13611 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.03□□□□□ -2.4
VCANP13611 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
VCANP13611 AC092634.2-201ENST00000428146 1010 ntBASIC0.03□□□□□ -2.4
VCANP13611 AL590365.1-201ENST00000450788 243 ntBASIC0.03□□□□□ -2.4
VCANP13611 RPS26P45-201ENST00000471748 340 ntBASIC0.03□□□□□ -2.4
VCANP13611 OR5AK1P-201ENST00000524837 922 ntBASIC0.03□□□□□ -2.4
VCANP13611 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.03□□□□□ -2.4
VCANP13611 AL021997.1-201ENST00000605757 193 ntBASIC0.03□□□□□ -2.4
VCANP13611 OR5AK4P-201ENST00000635912 903 ntBASIC0.03□□□□□ -2.4
VCANP13611 MIR4320-201ENST00000636981 65 ntBASIC0.03□□□□□ -2.4
VCANP13611 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.03□□□□□ -2.41
VCANP13611 SNORA3A-201ENST00000364113 130 ntBASIC0.03□□□□□ -2.41
VCANP13611 RNU6-1104P-201ENST00000384723 104 ntBASIC0.03□□□□□ -2.41
VCANP13611 AL356421.1-201ENST00000403255 413 ntBASIC0.03□□□□□ -2.41
VCANP13611 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.03□□□□□ -2.41
VCANP13611 AL513343.1-201ENST00000451818 792 ntBASIC0.03□□□□□ -2.41
VCANP13611 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.03□□□□□ -2.41
VCANP13611 AC078899.2-201ENST00000595282 212 ntBASIC0.03□□□□□ -2.41
VCANP13611 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.02□□□□□ -2.41
VCANP13611 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.02□□□□□ -2.41
VCANP13611 AC104417.1-201ENST00000523974 751 ntBASIC0.02□□□□□ -2.41
VCANP13611 AC017083.3-201ENST00000609955 700 ntBASIC0.02□□□□□ -2.41
VCANP13611 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
VCANP13611 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.02□□□□□ -2.41
VCANP13611 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.02□□□□□ -2.41
VCANP13611 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.02□□□□□ -2.41
VCANP13611 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.02□□□□□ -2.41
VCANP13611 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.02□□□□□ -2.41
VCANP13611 RNU6-1222P-201ENST00000384615 107 ntBASIC0.01□□□□□ -2.41
VCANP13611 MIR1295A-201ENST00000408463 79 ntBASIC0.01□□□□□ -2.41
VCANP13611 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.01□□□□□ -2.41
VCANP13611 AL136372.1-201ENST00000403060 228 ntBASIC0.01□□□□□ -2.41
VCANP13611 AC067838.1-201ENST00000606064 577 ntBASIC0.01□□□□□ -2.41
VCANP13611 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.01□□□□□ -2.41
VCANP13611 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
VCANP13611 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0□□□□□ -2.41
VCANP13611 MTCO2P8-201ENST00000412213 658 ntBASIC0□□□□□ -2.41
VCANP13611 SNRPFP2-201ENST00000440710 251 ntBASIC0□□□□□ -2.41
VCANP13611 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0□□□□□ -2.41
VCANP13611 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0□□□□□ -2.41
VCANP13611 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0□□□□□ -2.41
VCANP13611 AC010301.1-201ENST00000473936 355 ntBASIC0□□□□□ -2.41
VCANP13611 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0□□□□□ -2.41
VCANP13611 MTND4P14-201ENST00000435799 1354 ntBASIC-0□□□□□ -2.41
VCANP13611 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC-0□□□□□ -2.41
VCANP13611 AL713866.2-201ENST00000603579 219 ntBASIC-0□□□□□ -2.41
VCANP13611 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
VCANP13611 RNU4-48P-201ENST00000365559 182 ntBASIC-0.01□□□□□ -2.41
VCANP13611 AC013410.2-201ENST00000422627 201 ntBASIC-0.01□□□□□ -2.41
VCANP13611 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.01□□□□□ -2.41
VCANP13611 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.01□□□□□ -2.41
VCANP13611 SCARNA8-201ENST00000515924 131 ntBASIC-0.01□□□□□ -2.41
VCANP13611 AC007751.1-201ENST00000529260 376 ntBASIC-0.01□□□□□ -2.41
VCANP13611 MIR4764-201ENST00000580680 88 ntBASIC-0.01□□□□□ -2.41
VCANP13611 AC135507.1-201ENST00000607214 561 ntBASIC-0.01□□□□□ -2.41
VCANP13611 DUXAP10-204ENST00000612052 616 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms