Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MTND4P23-201ENST00000447723 1363 ntBASIC4.28□□□□□ -1.72
APPP05067 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
APPP05067 SNORA7.2-201ENST00000364446 145 ntBASIC4.28□□□□□ -1.72
APPP05067 SNORD116-11-201ENST00000383882 92 ntBASIC4.28□□□□□ -1.72
APPP05067 SNORD73A-201ENST00000386062 65 ntBASIC4.28□□□□□ -1.72
APPP05067 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
APPP05067 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.28□□□□□ -1.72
APPP05067 AC080125.1-201ENST00000414888 684 ntBASIC4.28□□□□□ -1.72
APPP05067 EI24P1-201ENST00000416584 867 ntBASIC4.28□□□□□ -1.72
APPP05067 DBIP2-201ENST00000419076 262 ntBASIC4.28□□□□□ -1.72
APPP05067 PIGFP3-201ENST00000441918 722 ntBASIC4.28□□□□□ -1.72
APPP05067 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.28□□□□□ -1.72
APPP05067 KC877373.1-201ENST00000479066 408 ntBASIC4.28□□□□□ -1.72
APPP05067 AC008526.1-201ENST00000509149 338 ntBASIC4.28□□□□□ -1.72
APPP05067 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.28□□□□□ -1.72
APPP05067 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.28□□□□□ -1.72
APPP05067 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.28□□□□□ -1.72
APPP05067 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.28□□□□□ -1.72
APPP05067 AC022432.1-201ENST00000595739 310 ntBASIC4.28□□□□□ -1.72
APPP05067 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.28□□□□□ -1.72
APPP05067 AC138627.2-201ENST00000624202 601 ntBASIC4.28□□□□□ -1.72
APPP05067 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
APPP05067 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.27□□□□□ -1.73
APPP05067 SRP72P2-201ENST00000344851 1979 ntBASIC4.27□□□□□ -1.73
APPP05067 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.27□□□□□ -1.73
APPP05067 Y_RNA.135-201ENST00000363439 95 ntBASIC4.27□□□□□ -1.73
APPP05067 RNU6-266P-201ENST00000364225 107 ntBASIC4.27□□□□□ -1.73
APPP05067 Y_RNA.315-201ENST00000365117 102 ntBASIC4.27□□□□□ -1.73
APPP05067 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
APPP05067 RNU6-43P-201ENST00000384302 107 ntBASIC4.27□□□□□ -1.73
APPP05067 MIR493-201ENST00000385254 89 ntBASIC4.27□□□□□ -1.73
APPP05067 RN7SKP158-201ENST00000410453 326 ntBASIC4.27□□□□□ -1.73
APPP05067 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.27□□□□□ -1.73
APPP05067 CYCSP33-201ENST00000414485 327 ntBASIC4.27□□□□□ -1.73
APPP05067 TRIAP1P1-201ENST00000427062 225 ntBASIC4.27□□□□□ -1.73
APPP05067 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.27□□□□□ -1.73
APPP05067 AL591704.1-201ENST00000432574 275 ntBASIC4.27□□□□□ -1.73
APPP05067 MTCYBP6-201ENST00000441810 138 ntBASIC4.27□□□□□ -1.73
APPP05067 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.27□□□□□ -1.73
APPP05067 CECR9-201ENST00000453421 199 ntBASIC4.27□□□□□ -1.73
APPP05067 RN7SL93P-201ENST00000463035 293 ntBASIC4.27□□□□□ -1.73
APPP05067 HMGN1P10-201ENST00000474557 553 ntBASIC4.27□□□□□ -1.73
APPP05067 RPS27P27-201ENST00000498779 255 ntBASIC4.27□□□□□ -1.73
APPP05067 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.27□□□□□ -1.73
APPP05067 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.27□□□□□ -1.73
APPP05067 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.27□□□□□ -1.73
APPP05067 AC093249.1-201ENST00000567049 203 ntBASIC4.27□□□□□ -1.73
APPP05067 AC124303.1-201ENST00000605703 360 ntBASIC4.27□□□□□ -1.73
APPP05067 AL022345.1-201ENST00000607292 135 ntBASIC4.27□□□□□ -1.73
APPP05067 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.27□□□□□ -1.73
APPP05067 AC244205.2-202ENST00000635781 342 ntBASIC4.27□□□□□ -1.73
APPP05067 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APPP05067 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.26□□□□□ -1.73
APPP05067 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 RNU6-1013P-201ENST00000384180 107 ntBASIC4.26□□□□□ -1.73
APPP05067 RNU6-474P-201ENST00000384243 107 ntBASIC4.26□□□□□ -1.73
APPP05067 MIR449B-201ENST00000384995 97 ntBASIC4.26□□□□□ -1.73
APPP05067 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
APPP05067 RNU2-3P-201ENST00000410144 191 ntBASIC4.26□□□□□ -1.73
APPP05067 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.26□□□□□ -1.73
APPP05067 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.26□□□□□ -1.73
APPP05067 TRBV1-201ENST00000476502 284 ntBASIC4.26□□□□□ -1.73
APPP05067 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.26□□□□□ -1.73
APPP05067 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.26□□□□□ -1.73
APPP05067 MIR4444-1-201ENST00000581696 74 ntBASIC4.26□□□□□ -1.73
APPP05067 MIR4444-2-201ENST00000584390 74 ntBASIC4.26□□□□□ -1.73
APPP05067 AC123912.5-201ENST00000605470 343 ntBASIC4.26□□□□□ -1.73
APPP05067 MTND1P37-201ENST00000636562 264 ntBASIC4.26□□□□□ -1.73
APPP05067 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.26□□□□□ -1.73
APPP05067 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APPP05067 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
APPP05067 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
APPP05067 RNU6-1227P-201ENST00000383981 107 ntBASIC4.25□□□□□ -1.73
APPP05067 RNU6-306P-201ENST00000384617 107 ntBASIC4.25□□□□□ -1.73
APPP05067 RNU6-1179P-201ENST00000384667 107 ntBASIC4.25□□□□□ -1.73
APPP05067 RNA5SP171-201ENST00000391071 115 ntBASIC4.25□□□□□ -1.73
APPP05067 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
APPP05067 U3.42-201ENST00000408746 214 ntBASIC4.25□□□□□ -1.73
APPP05067 RPL37P10-201ENST00000412884 288 ntBASIC4.25□□□□□ -1.73
APPP05067 AC074085.1-201ENST00000413598 418 ntBASIC4.25□□□□□ -1.73
APPP05067 HMGB1P9-201ENST00000429856 646 ntBASIC4.25□□□□□ -1.73
APPP05067 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.25□□□□□ -1.73
APPP05067 VDAC1P3-201ENST00000434069 851 ntBASIC4.25□□□□□ -1.73
APPP05067 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.25□□□□□ -1.73
APPP05067 MTND1P17-201ENST00000448961 204 ntBASIC4.25□□□□□ -1.73
APPP05067 AC107399.1-201ENST00000451226 265 ntBASIC4.25□□□□□ -1.73
APPP05067 MTCO3P10-201ENST00000455912 772 ntBASIC4.25□□□□□ -1.73
APPP05067 Y_RNA.635-201ENST00000459041 101 ntBASIC4.25□□□□□ -1.73
APPP05067 AC087588.1-201ENST00000462203 316 ntBASIC4.25□□□□□ -1.73
APPP05067 AC027575.1-201ENST00000481064 460 ntBASIC4.25□□□□□ -1.73
APPP05067 AC020661.2-201ENST00000560114 134 ntBASIC4.25□□□□□ -1.73
APPP05067 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms