Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC068792.1-201ENST00000621354 417 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL359740.1-201ENST00000624340 592 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC009161.2-201ENST00000624626 138 ntBASIC2.53□□□□□ -2
MT-ND1P03886 MIR6863-201ENST00000636112 90 ntBASIC2.53□□□□□ -2
MT-ND1P03886 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
MT-ND1P03886 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND1P03886 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.53□□□□□ -2
MT-ND1P03886 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
MT-ND1P03886 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
MT-ND1P03886 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND1P03886 Z82195.2-201ENST00000612348 18351 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.52□□□□□ -2.01
MT-ND1P03886 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
MT-ND1P03886 AC073343.1-201ENST00000328239 651 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 RNU6-1097P-201ENST00000363586 107 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 RNU6-288P-201ENST00000363690 104 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 Y_RNA.381-201ENST00000365666 102 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 Y_RNA.409-201ENST00000383990 98 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 RNU6-1215P-201ENST00000384441 102 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 RNU6-192P-201ENST00000391253 100 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 Y_RNA.599-201ENST00000410489 109 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 RNU4-55P-201ENST00000410731 137 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 NDUFS5P4-201ENST00000412983 318 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AF274854.1-201ENST00000413236 615 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 ELOCP14-201ENST00000428070 331 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AC112220.1-201ENST00000434628 355 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 ELOCP7-201ENST00000439968 331 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND1P03886 MTND1P1-201ENST00000445453 368 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AL671855.1-201ENST00000446875 1203 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MT-ND1P03886 RPL37P6-201ENST00000460682 294 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AC126389.1-201ENST00000477436 290 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 RPS29P20-201ENST00000489592 171 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AC023194.1-201ENST00000493084 308 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.52□□□□□ -2.01
MT-ND1P03886 RN7SKP57-201ENST00000517248 293 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AC090136.1-201ENST00000520009 240 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 MTCYBP20-201ENST00000524239 1129 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND1P03886 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.52□□□□□ -2.01
MT-ND1P03886 MIR3944-201ENST00000581277 108 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AC090616.3-201ENST00000582184 217 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AL365204.3-201ENST00000612448 685 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 ATP5A1P2-202ENST00000616464 443 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 AC007998.5-201ENST00000622938 237 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
MT-ND1P03886 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.52□□□□□ -2.01
MT-ND1P03886 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
MT-ND1P03886 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
MT-ND1P03886 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MT-ND1P03886 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
MT-ND1P03886 AC135776.4-201ENST00000624300 1904 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 UBE2L2-201ENST00000254302 429 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 Y_RNA.1-201ENST00000352915 104 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RNU6-61P-201ENST00000365528 109 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
MT-ND1P03886 RNU6-641P-201ENST00000384006 107 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RNU6-750P-201ENST00000390946 107 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RNU6-780P-201ENST00000391030 104 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 UBE2V1P2-201ENST00000397758 440 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RNU2-9P-201ENST00000410194 145 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RNU2-49P-201ENST00000410666 184 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MT-ND1P03886 AC096649.2-201ENST00000416186 393 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 MTATP6P18-201ENST00000417994 673 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RPL35AP12-201ENST00000425362 338 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.51□□□□□ -2.01
MT-ND1P03886 AC073464.1-201ENST00000429823 534 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 HMGB1P9-201ENST00000429856 646 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.51□□□□□ -2.01
MT-ND1P03886 AC002486.1-201ENST00000435098 391 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RPL23AP20-201ENST00000447965 421 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 AC133134.1-201ENST00000466800 359 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RPS27P27-201ENST00000498779 255 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MT-ND1P03886 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.51□□□□□ -2.01
MT-ND1P03886 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RNA5SP341-201ENST00000516261 117 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 SNORD27.1-201ENST00000516319 72 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 RNU6-410P-201ENST00000517006 107 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 SCARNA11.3-201ENST00000517276 130 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 NACAP3-201ENST00000552100 481 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 MIR3117-201ENST00000584034 78 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 MIR3616-201ENST00000584070 92 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.51□□□□□ -2.01
MT-ND1P03886 AC098826.3-201ENST00000603823 466 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 AC004805.2-201ENST00000605382 482 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 AC122108.2-201ENST00000611946 526 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MT-ND1P03886 AC130324.3-201ENST00000614165 542 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.51□□□□□ -2.01
MT-ND1P03886 FRG1KP-201ENST00000623592 341 ntBASIC2.51□□□□□ -2.01
MT-ND1P03886 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.51□□□□□ -2.01
MT-ND1P03886 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.51□□□□□ -2.01
MT-ND1P03886 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MT-ND1P03886 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MT-ND1P03886 AL359693.1-201ENST00000614959 2407 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms