Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.48□□□□□ -2.33
SPTA1P02549 MIR146A-201ENST00000385201 99 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 RPL23AP32-201ENST00000395315 459 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 YWHAZP8-201ENST00000436935 731 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.47□□□□□ -2.33
SPTA1P02549 MTND2P19-201ENST00000449129 1012 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.47□□□□□ -2.33
SPTA1P02549 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.47□□□□□ -2.33
SPTA1P02549 AC104692.1-201ENST00000472406 90 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 RPS27P22-201ENST00000478056 241 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AC111193.1-201ENST00000504097 155 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 RNU4-77P-201ENST00000516692 156 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AC007834.2-201ENST00000536310 343 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 HMGN1P30-201ENST00000589286 268 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AC068620.3-201ENST00000602749 560 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.47□□□□□ -2.33
SPTA1P02549 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
SPTA1P02549 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.47□□□□□ -2.33
SPTA1P02549 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SPTA1P02549 SNORD95.1-201ENST00000364099 68 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SPTA1P02549 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.47□□□□□ -2.33
SPTA1P02549 MTND6P13-201ENST00000443510 523 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 ANKRD26P4-201ENST00000455755 950 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.47□□□□□ -2.33
SPTA1P02549 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.47□□□□□ -2.33
SPTA1P02549 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.47□□□□□ -2.33
SPTA1P02549 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 RNU6-496P-201ENST00000516145 99 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.47□□□□□ -2.33
SPTA1P02549 AC025857.1-201ENST00000525252 377 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AP003484.1-201ENST00000530974 250 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.47□□□□□ -2.33
SPTA1P02549 DUXAP1-201ENST00000556632 463 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.47□□□□□ -2.33
SPTA1P02549 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.47□□□□□ -2.33
SPTA1P02549 AGGF1P5-201ENST00000567900 919 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 RSL24D1P11-201ENST00000591045 491 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 AC090132.2-201ENST00000615881 347 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
SPTA1P02549 AL391516.1-201ENST00000554380 2449 ntBASIC0.47□□□□□ -2.33
SPTA1P02549 RNU6-1305P-201ENST00000364353 104 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 SNORA8.3-201ENST00000384679 139 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 MIR515-2-201ENST00000384883 83 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 MIR515-1-201ENST00000384884 83 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.46□□□□□ -2.34
SPTA1P02549 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.46□□□□□ -2.34
SPTA1P02549 AL035666.1-201ENST00000446195 348 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 SNORA70.16-201ENST00000516390 95 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.46□□□□□ -2.34
SPTA1P02549 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.46□□□□□ -2.34
SPTA1P02549 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.46□□□□□ -2.34
SPTA1P02549 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.46□□□□□ -2.34
SPTA1P02549 FAM60BP-201ENST00000578364 658 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 MZT1P2-201ENST00000604387 248 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SPTA1P02549 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SPTA1P02549 U3.20-201ENST00000390909 217 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 OR9R1P-201ENST00000412200 877 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 MED14P1-201ENST00000430517 648 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.46□□□□□ -2.34
SPTA1P02549 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.46□□□□□ -2.34
SPTA1P02549 AC087884.1-201ENST00000469738 328 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 RPS27P23-201ENST00000487608 251 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.46□□□□□ -2.34
SPTA1P02549 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.46□□□□□ -2.34
SPTA1P02549 OR5AK1P-201ENST00000524837 922 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.46□□□□□ -2.34
SPTA1P02549 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.46□□□□□ -2.34
SPTA1P02549 AC012414.6-201ENST00000568241 401 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.46□□□□□ -2.34
SPTA1P02549 VN1R82P-201ENST00000601481 356 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 AP001330.4-201ENST00000604350 154 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.46□□□□□ -2.34
SPTA1P02549 AC006001.4-201ENST00000622243 395 ntBASIC0.46□□□□□ -2.34
SPTA1P02549 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SPTA1P02549 RNU6-1155P-201ENST00000363554 107 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 PIGPP2-201ENST00000411569 458 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.45□□□□□ -2.34
SPTA1P02549 AL359385.1-201ENST00000456509 365 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.45□□□□□ -2.34
SPTA1P02549 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.45□□□□□ -2.34
SPTA1P02549 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SPTA1P02549 AC118282.2-201ENST00000508739 374 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 MIR4305-201ENST00000583252 102 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AC002545.1-201ENST00000592511 181 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AC073111.2-201ENST00000605657 1075 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AC004852.3-201ENST00000614131 326 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AC095031.1-201ENST00000623685 672 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 RNA5SP258-201ENST00000362750 119 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 RNU6-712P-201ENST00000410558 100 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 OFD1P18Y-201ENST00000420889 959 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.45□□□□□ -2.34
SPTA1P02549 TRGVB-201ENST00000453257 471 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 snoU13.11-201ENST00000459219 104 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 SNORA3.4-201ENST00000515969 96 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 RNU7-193P-201ENST00000516723 65 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.45□□□□□ -2.34
SPTA1P02549 CYCSP2-201ENST00000558168 301 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms