Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MTCO3P30-201ENST00000426425 670 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 Z98742.2-201ENST00000431564 187 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RPL23AP30-201ENST00000432419 501 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AL591704.1-201ENST00000432574 275 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AL445567.1-201ENST00000439121 144 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RNU6-717P-201ENST00000459076 104 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RPL23AP45-201ENST00000476406 468 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC109486.1-201ENST00000486833 374 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC096576.1-201ENST00000489014 359 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 FAM92A1P2-202ENST00000504766 877 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC023141.11-201ENST00000508864 202 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 NDUFB4P2-201ENST00000509515 391 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RNU7-51P-201ENST00000516560 62 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RNU1-40P-201ENST00000516816 164 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RNU1-97P-201ENST00000516872 164 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 SNORA31.19-201ENST00000517079 126 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC106038.2-201ENST00000520706 568 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 RPL21P5-201ENST00000554662 472 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 MIR4782-201ENST00000577987 79 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 SNORD53-201ENST00000579969 78 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 MIR3199-1-201ENST00000582434 88 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC009977.1-201ENST00000586015 570 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC174048.1-201ENST00000603389 144 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 HMGB1P24-202ENST00000615653 685 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AC091304.6-201ENST00000619761 202 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 AP000553.5-201ENST00000641933 54 ntBASIC1.75□□□□□ -2.13
HLA-DQA1P01909 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DQA1P01909 MTND4P4-201ENST00000439033 1366 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC010329.5-201ENST00000623497 2174 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 SNORA75B-201ENST00000384053 137 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 MIR301A-201ENST00000385261 86 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 SNORA40C-201ENST00000391285 128 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AL356057.3-201ENST00000402607 340 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 NDUFB4P4-201ENST00000404822 243 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 RNU6-1025P-201ENST00000410629 104 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 RNU2-52P-201ENST00000410680 190 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 USP9YP6-201ENST00000413550 854 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC007560.1-201ENST00000426912 237 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 MTND1P30-201ENST00000441241 901 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 USP9YP15-201ENST00000442391 422 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 FABP5P13-201ENST00000452144 328 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 RNU7-26P-201ENST00000458980 63 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 RAP1BP2-201ENST00000478270 544 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC026801.1-201ENST00000497178 464 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 FABP5P5-201ENST00000515537 406 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 RNU2-46P-201ENST00000517038 113 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 RNU6-1220P-201ENST00000517126 108 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 RNU6-1315P-201ENST00000517187 99 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 EIF4BP1-201ENST00000554881 351 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 LINC00933-203ENST00000559812 219 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC023824.2-201ENST00000566185 400 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC025678.1-201ENST00000567861 338 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 MIR4319-201ENST00000577285 85 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 MIR1273C-201ENST00000578669 77 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AL021997.1-201ENST00000605757 193 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC092354.1-201ENST00000606057 376 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC091304.9-201ENST00000612091 226 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC245884.12-201ENST00000615364 59 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 MIR6134-201ENST00000617606 109 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC025048.6-202ENST00000627667 438 ntBASIC1.74□□□□□ -2.13
HLA-DQA1P01909 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DQA1P01909 AC004944.1-201ENST00000517807 3059 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms