Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ARPC3P5-201ENST00000448802 534 ntBASIC0.85□□□□□ -2.27
TNFP01375 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.85□□□□□ -2.27
TNFP01375 AC108059.3-201ENST00000456388 214 ntBASIC0.85□□□□□ -2.27
TNFP01375 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.85□□□□□ -2.27
TNFP01375 AC022483.1-201ENST00000514020 567 ntBASIC0.85□□□□□ -2.27
TNFP01375 RNA5SP291-201ENST00000517222 105 ntBASIC0.85□□□□□ -2.27
TNFP01375 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.85□□□□□ -2.27
TNFP01375 AP003497.1-201ENST00000528472 562 ntBASIC0.85□□□□□ -2.27
TNFP01375 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.85□□□□□ -2.27
TNFP01375 AC016727.2-201ENST00000603988 621 ntBASIC0.85□□□□□ -2.27
TNFP01375 MIR7111-201ENST00000619751 72 ntBASIC0.85□□□□□ -2.27
TNFP01375 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.85□□□□□ -2.27
TNFP01375 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
TNFP01375 MTND5P9-201ENST00000503854 1755 ntBASIC0.84□□□□□ -2.27
TNFP01375 SNORD115-3-201ENST00000363100 82 ntBASIC0.84□□□□□ -2.27
TNFP01375 RNU6-673P-201ENST00000365084 104 ntBASIC0.84□□□□□ -2.27
TNFP01375 MIR561-201ENST00000385216 97 ntBASIC0.84□□□□□ -2.27
TNFP01375 BTF3P8-201ENST00000414577 526 ntBASIC0.84□□□□□ -2.27
TNFP01375 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.84□□□□□ -2.27
TNFP01375 BPY2DP-201ENST00000422208 265 ntBASIC0.84□□□□□ -2.27
TNFP01375 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.84□□□□□ -2.27
TNFP01375 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.84□□□□□ -2.27
TNFP01375 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.84□□□□□ -2.27
TNFP01375 MTCO1P53-201ENST00000441633 699 ntBASIC0.84□□□□□ -2.27
TNFP01375 AL161788.1-201ENST00000441805 169 ntBASIC0.84□□□□□ -2.27
TNFP01375 AC117503.1-201ENST00000472241 394 ntBASIC0.84□□□□□ -2.27
TNFP01375 SMURF2P1-201ENST00000514992 481 ntBASIC0.84□□□□□ -2.27
TNFP01375 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TNFP01375 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.84□□□□□ -2.27
TNFP01375 AC004217.3-201ENST00000551552 878 ntBASIC0.84□□□□□ -2.27
TNFP01375 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.84□□□□□ -2.27
TNFP01375 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.84□□□□□ -2.28
TNFP01375 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.84□□□□□ -2.28
TNFP01375 AC110491.1-201ENST00000562191 2010 ntBASIC0.84□□□□□ -2.28
TNFP01375 RBBP8P1-201ENST00000449447 1844 ntBASIC0.83□□□□□ -2.28
TNFP01375 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TNFP01375 RNU6-1339P-201ENST00000363574 91 ntBASIC0.83□□□□□ -2.28
TNFP01375 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.83□□□□□ -2.28
TNFP01375 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.83□□□□□ -2.28
TNFP01375 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.83□□□□□ -2.28
TNFP01375 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.83□□□□□ -2.28
TNFP01375 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.83□□□□□ -2.28
TNFP01375 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.83□□□□□ -2.28
TNFP01375 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.83□□□□□ -2.28
TNFP01375 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.83□□□□□ -2.28
TNFP01375 DUXAP1-201ENST00000556632 463 ntBASIC0.83□□□□□ -2.28
TNFP01375 CYP3A137P-201ENST00000562436 69 ntBASIC0.83□□□□□ -2.28
TNFP01375 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.83□□□□□ -2.28
TNFP01375 AC079610.2-201ENST00000604818 690 ntBASIC0.83□□□□□ -2.28
TNFP01375 AC021646.1-201ENST00000605469 484 ntBASIC0.83□□□□□ -2.28
TNFP01375 AC022709.1-201ENST00000615967 87 ntBASIC0.83□□□□□ -2.28
TNFP01375 AL136313.1-201ENST00000624804 202 ntBASIC0.83□□□□□ -2.28
TNFP01375 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
TNFP01375 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.83□□□□□ -2.28
TNFP01375 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TNFP01375 RNU6-543P-201ENST00000362576 108 ntBASIC0.82□□□□□ -2.28
TNFP01375 MIR489-201ENST00000384923 84 ntBASIC0.82□□□□□ -2.28
TNFP01375 MIR1283-2-201ENST00000408621 87 ntBASIC0.82□□□□□ -2.28
TNFP01375 RNU2-36P-201ENST00000410361 191 ntBASIC0.82□□□□□ -2.28
TNFP01375 C1DP1-201ENST00000426049 402 ntBASIC0.82□□□□□ -2.28
TNFP01375 AC007919.1-201ENST00000429380 217 ntBASIC0.82□□□□□ -2.28
TNFP01375 USP9YP24-201ENST00000434374 697 ntBASIC0.82□□□□□ -2.28
TNFP01375 MTCO2P20-201ENST00000437339 673 ntBASIC0.82□□□□□ -2.28
TNFP01375 AC098831.1-201ENST00000440661 216 ntBASIC0.82□□□□□ -2.28
TNFP01375 DYNLT3P2-201ENST00000442517 295 ntBASIC0.82□□□□□ -2.28
TNFP01375 AC112492.4-201ENST00000456549 352 ntBASIC0.82□□□□□ -2.28
TNFP01375 RPL22P13-201ENST00000493291 347 ntBASIC0.82□□□□□ -2.28
TNFP01375 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.82□□□□□ -2.28
TNFP01375 AC005832.3-201ENST00000537929 631 ntBASIC0.82□□□□□ -2.28
TNFP01375 CYB5AP5-201ENST00000549779 389 ntBASIC0.82□□□□□ -2.28
TNFP01375 AL359212.1-201ENST00000556608 614 ntBASIC0.82□□□□□ -2.28
TNFP01375 AC009268.1-201ENST00000561352 1203 ntBASIC0.82□□□□□ -2.28
TNFP01375 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.82□□□□□ -2.28
TNFP01375 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.82□□□□□ -2.28
TNFP01375 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.82□□□□□ -2.28
TNFP01375 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
TNFP01375 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TNFP01375 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.82□□□□□ -2.28
TNFP01375 AC018630.2-201ENST00000534866 2403 ntBASIC0.81□□□□□ -2.28
TNFP01375 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TNFP01375 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.81□□□□□ -2.28
TNFP01375 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.81□□□□□ -2.28
TNFP01375 RPL39P29-201ENST00000447779 157 ntBASIC0.81□□□□□ -2.28
TNFP01375 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.81□□□□□ -2.28
TNFP01375 RNU6-775P-201ENST00000459318 96 ntBASIC0.81□□□□□ -2.28
TNFP01375 RNU7-40P-201ENST00000516397 64 ntBASIC0.81□□□□□ -2.28
TNFP01375 RNU6-902P-201ENST00000517212 91 ntBASIC0.81□□□□□ -2.28
TNFP01375 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.81□□□□□ -2.28
TNFP01375 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.81□□□□□ -2.28
TNFP01375 AC005668.1-201ENST00000571142 476 ntBASIC0.81□□□□□ -2.28
TNFP01375 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.81□□□□□ -2.28
TNFP01375 SNORD39.3-201ENST00000584451 71 ntBASIC0.81□□□□□ -2.28
TNFP01375 SNRPGP17-201ENST00000603780 214 ntBASIC0.81□□□□□ -2.28
TNFP01375 MIR8074-201ENST00000615081 81 ntBASIC0.81□□□□□ -2.28
TNFP01375 AL391597.1-201ENST00000618707 694 ntBASIC0.81□□□□□ -2.28
TNFP01375 AL512506.2-201ENST00000624472 458 ntBASIC0.81□□□□□ -2.28
TNFP01375 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TNFP01375 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TNFP01375 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.81□□□□□ -2.28
TNFP01375 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms