Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 AC034229.5-201ENST00000624258 185 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
CNOT4O95628 AC005183.1-201ENST00000603687 1979 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 AC233263.6-201ENST00000631132 1963 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CNOT4O95628 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CNOT4O95628 SDAD1P2-201ENST00000441308 2028 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.9□□□□□ -1.79
CNOT4O95628 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.9□□□□□ -1.79
CNOT4O95628 AC068254.2-201ENST00000623938 3577 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CNOT4O95628 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
CNOT4O95628 RNU6-790P-201ENST00000384479 105 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 MIR578-201ENST00000384828 96 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 AL445529.1-201ENST00000398713 389 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 MIR1302-6-201ENST00000408466 90 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 AL030996.1-201ENST00000411430 235 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 RPS15AP6-201ENST00000420703 385 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 UBE2D3P2-201ENST00000424409 445 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.89□□□□□ -1.79
CNOT4O95628 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.89□□□□□ -1.79
CNOT4O95628 PHBP16-201ENST00000446318 950 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.89□□□□□ -1.79
CNOT4O95628 RNU6-1132P-201ENST00000459214 107 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.89□□□□□ -1.79
CNOT4O95628 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.89□□□□□ -1.79
CNOT4O95628 AP000889.1-201ENST00000530968 660 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CNOT4O95628 AC026470.2-201ENST00000561492 181 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.89□□□□□ -1.79
CNOT4O95628 AL365434.2-201ENST00000607979 234 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 AL591516.1-201ENST00000611326 274 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 AL445567.2-201ENST00000618935 498 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CNOT4O95628 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.89□□□□□ -1.79
CNOT4O95628 AC140479.6-201ENST00000633535 357 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNOT4O95628 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
CNOT4O95628 ZNF72P-201ENST00000425869 1908 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 MTND5P27-201ENST00000428871 1720 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNOT4O95628 ZNF285B-201ENST00000561698 1767 ntBASIC3.89□□□□□ -1.79
CNOT4O95628 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
CNOT4O95628 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.88□□□□□ -1.79
CNOT4O95628 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
CNOT4O95628 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNOT4O95628 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.88□□□□□ -1.79
CNOT4O95628 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNOT4O95628 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.88□□□□□ -1.79
CNOT4O95628 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNOT4O95628 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CNOT4O95628 RNU6-209P-201ENST00000384118 107 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 U3.42-201ENST00000408746 214 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 RNU2-64P-201ENST00000411315 191 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.88□□□□□ -1.79
CNOT4O95628 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CNOT4O95628 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CNOT4O95628 SNORD127-201ENST00000458892 86 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 AC105137.1-201ENST00000484355 562 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 AC069499.1-201ENST00000489433 509 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 RN7SL604P-201ENST00000492589 296 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 AL592156.1-201ENST00000508758 304 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 ACA59.1-201ENST00000515966 143 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 Y_RNA.680-201ENST00000516441 93 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 RNU7-4P-201ENST00000516961 62 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.88□□□□□ -1.79
CNOT4O95628 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.88□□□□□ -1.79
CNOT4O95628 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.88□□□□□ -1.79
CNOT4O95628 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNOT4O95628 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.88□□□□□ -1.79
CNOT4O95628 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.88□□□□□ -1.79
CNOT4O95628 MTND4LP5-201ENST00000605152 292 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 AC103858.2-201ENST00000621471 543 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.88□□□□□ -1.79
CNOT4O95628 AC032011.1-201ENST00000611703 1549 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 AC010615.1-201ENST00000594254 1764 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 OR4G2P-202ENST00000641004 1759 ntBASIC3.88□□□□□ -1.79
CNOT4O95628 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CNOT4O95628 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.88□□□□□ -1.79
CNOT4O95628 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CNOT4O95628 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.87□□□□□ -1.79
CNOT4O95628 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CNOT4O95628 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNOT4O95628 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CNOT4O95628 RNY1P16-201ENST00000363063 111 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 Y_RNA.222-201ENST00000364264 102 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 U1.1-201ENST00000384101 164 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 SNORA36C-201ENST00000384289 132 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 RNU1-44P-201ENST00000384453 163 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 Y_RNA.534-201ENST00000384599 112 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 MIR514A1-201ENST00000385133 98 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 RNU6-607P-201ENST00000411283 108 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 AC063979.1-201ENST00000415539 377 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 RBMY1KP-201ENST00000423480 476 ntBASIC3.87□□□□□ -1.79
CNOT4O95628 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.87□□□□□ -1.79
CNOT4O95628 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CNOT4O95628 RPS3AP12-201ENST00000443616 753 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms