Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA1O95477 CBX3P6-201ENST00000430257 527 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AC087884.1-201ENST00000469738 328 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 RNU6-362P-201ENST00000516736 90 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AC006199.1-201ENST00000548728 219 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 IMMP1LP2-201ENST00000552954 492 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA1O95477 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA1O95477 AC025918.2-201ENST00000558683 763 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AC095057.3-201ENST00000567102 1157 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.82□□□□□ -2.28
ABCA1O95477 AC112191.3-201ENST00000604371 277 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AC090772.4-201ENST00000623599 362 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.82□□□□□ -2.28
ABCA1O95477 Y_RNA.274-201ENST00000364714 101 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
ABCA1O95477 MIR888-201ENST00000401186 77 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 NDUFS5P4-201ENST00000412983 318 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 FAM204CP-201ENST00000424489 642 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.82□□□□□ -2.28
ABCA1O95477 AC245102.2-201ENST00000448956 180 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 SUMO2P2-201ENST00000456482 255 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.82□□□□□ -2.28
ABCA1O95477 RNA5SP436-201ENST00000516020 115 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AL391813.1-201ENST00000603098 260 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AL713866.2-201ENST00000603579 219 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 MIR4275-201ENST00000636486 87 ntBASIC0.82□□□□□ -2.28
ABCA1O95477 AP000776.1-201ENST00000530032 1663 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 HAUS6P2-201ENST00000433254 2404 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 RNU2-28P-201ENST00000410457 189 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 RNU2-49P-201ENST00000410666 184 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 SDAD1P3-201ENST00000427380 333 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AL591212.2-201ENST00000433923 257 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AC092170.1-201ENST00000440211 356 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 HSPE1P24-201ENST00000450782 238 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 PNPLA4P1-201ENST00000458328 305 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
ABCA1O95477 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
ABCA1O95477 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
ABCA1O95477 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
ABCA1O95477 SNORA31.16-201ENST00000516773 139 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 SNORA44.1-201ENST00000517031 108 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 SNORA31.22-201ENST00000517204 135 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA1O95477 AC009268.1-201ENST00000561352 1203 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AL671309.1-201ENST00000603750 544 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AL138478.1-201ENST00000612252 832 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
ABCA1O95477 RNU5A-1-201ENST00000362698 116 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 RNU6-492P-201ENST00000363035 104 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 Y_RNA.433-201ENST00000384089 102 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AP002784.2-201ENST00000397300 549 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 PNRC2P1-201ENST00000423940 420 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AC005345.1-201ENST00000431868 217 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AL354941.1-201ENST00000438600 464 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA1O95477 GDI2P2-201ENST00000445131 608 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA1O95477 AC013828.1-201ENST00000481845 158 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AC108078.1-201ENST00000508073 725 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 RNA5SP121-201ENST00000516537 101 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 CBX3P8-201ENST00000532412 525 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AC104229.1-201ENST00000561364 255 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 ELOCP5-201ENST00000604924 333 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.81□□□□□ -2.28
ABCA1O95477 AC021755.4-201ENST00000616620 456 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AC092140.2-201ENST00000618027 521 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.81□□□□□ -2.28
ABCA1O95477 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.81□□□□□ -2.28
ABCA1O95477 ZNF702P-202ENST00000434269 1966 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ABCA1O95477 RNU6-884P-201ENST00000363889 107 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 U8.14-201ENST00000390843 143 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA1O95477 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA1O95477 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 NEFMP1-201ENST00000443423 1006 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.8□□□□□ -2.28
ABCA1O95477 AP1S2P1-201ENST00000457344 379 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.8□□□□□ -2.28
ABCA1O95477 AC098591.2-201ENST00000510152 315 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 AC048346.1-201ENST00000510247 144 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA1O95477 IGJP1-201ENST00000522682 475 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA1O95477 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.8□□□□□ -2.28
ABCA1O95477 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.8□□□□□ -2.28
ABCA1O95477 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.8□□□□□ -2.28
ABCA1O95477 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCA1O95477 AC016925.2-201ENST00000605108 242 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 AC009233.1-201ENST00000616477 371 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 AC005832.2-201ENST00000538921 1430 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
ABCA1O95477 SNORA8-201ENST00000384574 139 ntBASIC0.8□□□□□ -2.28
ABCA1O95477 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.8□□□□□ -2.28
ABCA1O95477 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms