Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNU6-434P-201ENST00000384376 107 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 SNORD70.1-201ENST00000391007 85 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 RNA5SP293-201ENST00000410527 113 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 RN7SKP27-201ENST00000410684 333 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 SNRPEP10-201ENST00000420249 274 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-2O95096 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-2O95096 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-2O95096 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-2O95096 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AC125238.1-201ENST00000448842 249 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 FGF7P6-202ENST00000451282 293 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 RN7SL330P-201ENST00000469709 307 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-2O95096 AC109925.1-201ENST00000478069 331 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AC011005.2-201ENST00000487324 359 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-2O95096 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.94□□□□□ -1.94
NKX2-2O95096 RPL38P4-201ENST00000502376 214 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-2O95096 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-2O95096 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX2-2O95096 RNU2-69P-201ENST00000516061 100 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 MTND4LP26-201ENST00000518144 282 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-2O95096 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-2O95096 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.94□□□□□ -1.94
NKX2-2O95096 AC021739.1-201ENST00000559631 174 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AC234778.2-201ENST00000566241 354 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 MIR5047-201ENST00000579212 100 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 MIR1254-2-201ENST00000579553 63 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AL451007.1-201ENST00000595491 289 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AC107304.1-201ENST00000604229 296 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 DISC2.1-201ENST00000612827 205 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 MIR6134-201ENST00000617606 109 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AC012314.7-201ENST00000619693 93 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 AC110079.1-202ENST00000635213 138 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NKX2-2O95096 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NKX2-2O95096 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NKX2-2O95096 MAPK10-266ENST00000641066 6555 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NKX2-2O95096 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
NKX2-2O95096 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NKX2-2O95096 Y_RNA.38-201ENST00000362617 102 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 RNA5SP72-201ENST00000364442 117 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 Y_RNA.573-201ENST00000384763 105 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 MIR518D-201ENST00000385014 87 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 MIR514A2-201ENST00000385131 88 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 MIR514A3-201ENST00000385132 88 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 U3.19-201ENST00000390893 196 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 SNORD37.1-201ENST00000390968 65 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 AL356057.2-201ENST00000403318 432 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 RNU4-47P-201ENST00000410876 114 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 RNU6-1068P-201ENST00000410958 103 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-2O95096 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-2O95096 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-2O95096 WASF1P1-201ENST00000447560 1131 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 RN7SL601P-201ENST00000471221 293 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 AC091885.1-201ENST00000506658 268 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 CCDC34P1-201ENST00000507441 517 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 MTND3P25-201ENST00000509243 135 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.93□□□□□ -1.94
NKX2-2O95096 RNU1-86P-201ENST00000516108 154 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 RNU6-718P-201ENST00000516166 105 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 RNU1-107P-201ENST00000516617 154 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 MTND1P35-201ENST00000526739 508 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 BNIP3P6-201ENST00000549284 499 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 LINC00933-203ENST00000559812 219 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 AC025281.1-201ENST00000567026 265 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-2O95096 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-2O95096 AC012119.1-201ENST00000603184 222 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-2O95096 AP003400.5-201ENST00000624827 617 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-2O95096 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.93□□□□□ -1.94
NKX2-2O95096 CDC27P3-201ENST00000635418 1910 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NKX2-2O95096 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-2O95096 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-2O95096 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.93□□□□□ -1.94
NKX2-2O95096 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-2O95096 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-2O95096 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
NKX2-2O95096 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
NKX2-2O95096 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-2O95096 Y_RNA.89-201ENST00000363031 102 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 Y_RNA.256-201ENST00000364594 104 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 RNU6-384P-201ENST00000364900 104 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 RNU4-20P-201ENST00000365601 151 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-2O95096 RNU6-38P-201ENST00000384085 107 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 SNORA7.4-201ENST00000384249 137 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 BTF3P7-201ENST00000407097 488 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 MIR1277-201ENST00000408536 78 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-2O95096 RNU2-3P-201ENST00000410144 191 ntBASIC2.92□□□□□ -1.94
NKX2-2O95096 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms