Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
RNF40O75150 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF40O75150 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF40O75150 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF40O75150 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF40O75150 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF40O75150 Y_RNA.245-201ENST00000364493 95 ntBASIC5.5□□□□□ -1.53
RNF40O75150 SNORA22-201ENST00000383907 134 ntBASIC5.5□□□□□ -1.53
RNF40O75150 SNORA51.8-201ENST00000384234 132 ntBASIC5.5□□□□□ -1.53
RNF40O75150 RNU6-1248P-201ENST00000391096 64 ntBASIC5.5□□□□□ -1.53
RNF40O75150 MIR1302-4-201ENST00000408701 150 ntBASIC5.5□□□□□ -1.53
RNF40O75150 AC138623.1-201ENST00000418060 216 ntBASIC5.5□□□□□ -1.53
RNF40O75150 AC063976.4-201ENST00000421971 163 ntBASIC5.5□□□□□ -1.53
RNF40O75150 RPS26P47-201ENST00000427219 348 ntBASIC5.5□□□□□ -1.53
RNF40O75150 AC010095.1-201ENST00000443543 144 ntBASIC5.5□□□□□ -1.53
RNF40O75150 AC124916.1-201ENST00000444020 547 ntBASIC5.5□□□□□ -1.53
RNF40O75150 ANP32BP2-201ENST00000454525 545 ntBASIC5.5□□□□□ -1.53
RNF40O75150 RN7SL860P-201ENST00000473738 223 ntBASIC5.5□□□□□ -1.53
RNF40O75150 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF40O75150 AC109810.1-201ENST00000534066 224 ntBASIC5.5□□□□□ -1.53
RNF40O75150 AC092490.3-201ENST00000545370 572 ntBASIC5.5□□□□□ -1.53
RNF40O75150 AC087783.2-201ENST00000605070 562 ntBASIC5.5□□□□□ -1.53
RNF40O75150 U7.2-201ENST00000607576 63 ntBASIC5.5□□□□□ -1.53
RNF40O75150 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.5□□□□□ -1.53
RNF40O75150 AC091932.3-201ENST00000624223 323 ntBASIC5.5□□□□□ -1.53
RNF40O75150 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF40O75150 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RNF40O75150 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF40O75150 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF40O75150 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RNF40O75150 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RNF40O75150 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF40O75150 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF40O75150 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF40O75150 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
RNF40O75150 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF40O75150 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF40O75150 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF40O75150 SNORA72.2-201ENST00000365028 127 ntBASIC5.49□□□□□ -1.53
RNF40O75150 RNA5SP44-201ENST00000410446 133 ntBASIC5.49□□□□□ -1.53
RNF40O75150 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF40O75150 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.49□□□□□ -1.53
RNF40O75150 AL158823.1-201ENST00000418441 478 ntBASIC5.49□□□□□ -1.53
RNF40O75150 AL138785.1-201ENST00000425821 331 ntBASIC5.49□□□□□ -1.53
RNF40O75150 RPL35AP21-201ENST00000437667 333 ntBASIC5.49□□□□□ -1.53
RNF40O75150 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF40O75150 U8.19-201ENST00000459095 133 ntBASIC5.49□□□□□ -1.53
RNF40O75150 AC009127.1-201ENST00000467090 155 ntBASIC5.49□□□□□ -1.53
RNF40O75150 RN7SL814P-201ENST00000487715 300 ntBASIC5.49□□□□□ -1.53
RNF40O75150 Y_RNA.694-201ENST00000516677 117 ntBASIC5.49□□□□□ -1.53
RNF40O75150 AC021269.2-201ENST00000532318 330 ntBASIC5.49□□□□□ -1.53
RNF40O75150 AP004607.2-201ENST00000533949 322 ntBASIC5.49□□□□□ -1.53
RNF40O75150 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.49□□□□□ -1.53
RNF40O75150 AC090049.2-201ENST00000550377 109 ntBASIC5.49□□□□□ -1.53
RNF40O75150 MIR5571-201ENST00000577998 113 ntBASIC5.49□□□□□ -1.53
RNF40O75150 MIR5582-201ENST00000579697 68 ntBASIC5.49□□□□□ -1.53
RNF40O75150 AC099669.2-201ENST00000616549 437 ntBASIC5.49□□□□□ -1.53
RNF40O75150 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.49□□□□□ -1.53
RNF40O75150 AC039056.2-201ENST00000622261 511 ntBASIC5.49□□□□□ -1.53
RNF40O75150 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF40O75150 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF40O75150 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF40O75150 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF40O75150 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF40O75150 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF40O75150 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF40O75150 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RNF40O75150 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF40O75150 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF40O75150 AC063976.2-201ENST00000425667 3556 ntBASIC5.48□□□□□ -1.53
RNF40O75150 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF40O75150 RNU1-146P-201ENST00000364015 165 ntBASIC5.48□□□□□ -1.53
RNF40O75150 SNORA56-201ENST00000383966 129 ntBASIC5.48□□□□□ -1.53
RNF40O75150 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RNF40O75150 RNU6-837P-201ENST00000391056 108 ntBASIC5.48□□□□□ -1.53
RNF40O75150 Y_RNA.595-201ENST00000410403 105 ntBASIC5.48□□□□□ -1.53
RNF40O75150 AC098614.2-201ENST00000426040 255 ntBASIC5.48□□□□□ -1.53
RNF40O75150 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF40O75150 RPL12P46-201ENST00000436610 195 ntBASIC5.48□□□□□ -1.53
RNF40O75150 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF40O75150 RN7SL591P-201ENST00000496150 292 ntBASIC5.48□□□□□ -1.53
RNF40O75150 SCARNA15.2-201ENST00000516409 127 ntBASIC5.48□□□□□ -1.53
RNF40O75150 SNORA43.2-201ENST00000516652 128 ntBASIC5.48□□□□□ -1.53
RNF40O75150 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF40O75150 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF40O75150 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF40O75150 FAM25E-202ENST00000608562 189 ntBASIC5.48□□□□□ -1.53
RNF40O75150 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
RNF40O75150 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF40O75150 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF40O75150 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF40O75150 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF40O75150 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
RNF40O75150 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF40O75150 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
RNF40O75150 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms