Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
BRD4O60885 MIR96-201ENST00000362288 78 ntBASIC1.91□□□□□ -2.1
BRD4O60885 AL079342.2-201ENST00000403367 482 ntBASIC1.91□□□□□ -2.1
BRD4O60885 MTND4P3-201ENST00000417829 541 ntBASIC1.91□□□□□ -2.1
BRD4O60885 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.91□□□□□ -2.1
BRD4O60885 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.91□□□□□ -2.1
BRD4O60885 MED14P1-201ENST00000430517 648 ntBASIC1.91□□□□□ -2.1
BRD4O60885 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.91□□□□□ -2.1
BRD4O60885 AL121769.1-201ENST00000469473 401 ntBASIC1.91□□□□□ -2.1
BRD4O60885 AC104685.1-201ENST00000502445 371 ntBASIC1.91□□□□□ -2.1
BRD4O60885 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.91□□□□□ -2.1
BRD4O60885 AP005639.2-201ENST00000527592 928 ntBASIC1.91□□□□□ -2.1
BRD4O60885 DEFB130C-202ENST00000530001 230 ntBASIC1.91□□□□□ -2.1
BRD4O60885 AC016957.1-201ENST00000534895 309 ntBASIC1.91□□□□□ -2.1
BRD4O60885 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.91□□□□□ -2.1
BRD4O60885 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.91□□□□□ -2.1
BRD4O60885 MTND4LP5-201ENST00000605152 292 ntBASIC1.91□□□□□ -2.1
BRD4O60885 AC091946.2-201ENST00000606105 291 ntBASIC1.91□□□□□ -2.1
BRD4O60885 AC005332.6-201ENST00000613178 446 ntBASIC1.91□□□□□ -2.1
BRD4O60885 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.91□□□□□ -2.1
BRD4O60885 AP003485.1-201ENST00000625093 753 ntBASIC1.91□□□□□ -2.1
BRD4O60885 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.91□□□□□ -2.1
BRD4O60885 Y_RNA.25-201ENST00000362528 102 ntBASIC1.9□□□□□ -2.11
BRD4O60885 Y_RNA.578-201ENST00000390903 88 ntBASIC1.9□□□□□ -2.11
BRD4O60885 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.9□□□□□ -2.11
BRD4O60885 ZNF863P-201ENST00000426746 417 ntBASIC1.9□□□□□ -2.11
BRD4O60885 AL353691.1-201ENST00000451332 387 ntBASIC1.9□□□□□ -2.11
BRD4O60885 SUMO2P2-201ENST00000456482 255 ntBASIC1.9□□□□□ -2.11
BRD4O60885 AC027575.1-201ENST00000481064 460 ntBASIC1.9□□□□□ -2.11
BRD4O60885 SUMO2P5-201ENST00000506790 245 ntBASIC1.9□□□□□ -2.11
BRD4O60885 RNA5SP137-201ENST00000516833 135 ntBASIC1.9□□□□□ -2.11
BRD4O60885 RNU6-1028P-201ENST00000517164 93 ntBASIC1.9□□□□□ -2.11
BRD4O60885 RNU6-1261P-201ENST00000517194 104 ntBASIC1.9□□□□□ -2.11
BRD4O60885 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
BRD4O60885 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
BRD4O60885 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.9□□□□□ -2.11
BRD4O60885 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.9□□□□□ -2.11
BRD4O60885 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.9□□□□□ -2.11
BRD4O60885 AC008121.1-201ENST00000603244 268 ntBASIC1.9□□□□□ -2.11
BRD4O60885 FTX_3.1-201ENST00000610451 147 ntBASIC1.9□□□□□ -2.11
BRD4O60885 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.9□□□□□ -2.11
BRD4O60885 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
BRD4O60885 RNU4-42P-201ENST00000364738 142 ntBASIC1.89□□□□□ -2.11
BRD4O60885 RNU6-657P-201ENST00000383904 107 ntBASIC1.89□□□□□ -2.11
BRD4O60885 RNU6-224P-201ENST00000384055 107 ntBASIC1.89□□□□□ -2.11
BRD4O60885 MTCO1P56-201ENST00000401674 224 ntBASIC1.89□□□□□ -2.11
BRD4O60885 AC074117.2-201ENST00000417130 397 ntBASIC1.89□□□□□ -2.11
BRD4O60885 PGBD4P6-201ENST00000421501 610 ntBASIC1.89□□□□□ -2.11
BRD4O60885 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.89□□□□□ -2.11
BRD4O60885 RPS6P15-201ENST00000431996 751 ntBASIC1.89□□□□□ -2.11
BRD4O60885 USP9YP22-201ENST00000438971 294 ntBASIC1.89□□□□□ -2.11
BRD4O60885 MTCYBP11-201ENST00000447254 1109 ntBASIC1.89□□□□□ -2.11
BRD4O60885 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.89□□□□□ -2.11
BRD4O60885 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.89□□□□□ -2.11
BRD4O60885 AC023790.1-201ENST00000482174 347 ntBASIC1.89□□□□□ -2.11
BRD4O60885 HSPA8P13-201ENST00000523715 472 ntBASIC1.89□□□□□ -2.11
BRD4O60885 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.89□□□□□ -2.11
BRD4O60885 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
BRD4O60885 AC010889.1-201ENST00000566193 2666 ntBASIC1.89□□□□□ -2.11
BRD4O60885 AC138915.2-201ENST00000569776 97 ntBASIC1.89□□□□□ -2.11
BRD4O60885 MIR3912-201ENST00000577566 105 ntBASIC1.89□□□□□ -2.11
BRD4O60885 AC105245.1-201ENST00000581934 244 ntBASIC1.89□□□□□ -2.11
BRD4O60885 UBE2L4-201ENST00000587688 464 ntBASIC1.89□□□□□ -2.11
BRD4O60885 BNIP3P24-201ENST00000593398 557 ntBASIC1.89□□□□□ -2.11
BRD4O60885 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.89□□□□□ -2.11
BRD4O60885 AC007349.4-201ENST00000608114 532 ntBASIC1.89□□□□□ -2.11
BRD4O60885 MIR4275-201ENST00000636486 87 ntBASIC1.89□□□□□ -2.11
BRD4O60885 U6.101-201ENST00000637707 76 ntBASIC1.89□□□□□ -2.11
BRD4O60885 MIR506-201ENST00000384998 124 ntBASIC1.88□□□□□ -2.11
BRD4O60885 RNU6-298P-201ENST00000390888 96 ntBASIC1.88□□□□□ -2.11
BRD4O60885 SNORD65.1-201ENST00000390889 71 ntBASIC1.88□□□□□ -2.11
BRD4O60885 RNU2-63P-201ENST00000410792 194 ntBASIC1.88□□□□□ -2.11
BRD4O60885 VN1R36P-201ENST00000414936 291 ntBASIC1.88□□□□□ -2.11
BRD4O60885 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
BRD4O60885 USP9YP21-201ENST00000420603 432 ntBASIC1.88□□□□□ -2.11
BRD4O60885 AC007742.1-201ENST00000425789 329 ntBASIC1.88□□□□□ -2.11
BRD4O60885 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.88□□□□□ -2.11
BRD4O60885 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.88□□□□□ -2.11
BRD4O60885 ELOCP26-201ENST00000436067 329 ntBASIC1.88□□□□□ -2.11
BRD4O60885 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.88□□□□□ -2.11
BRD4O60885 AC079776.3-201ENST00000450665 370 ntBASIC1.88□□□□□ -2.11
BRD4O60885 MTCYBP18-201ENST00000501056 747 ntBASIC1.88□□□□□ -2.11
BRD4O60885 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.88□□□□□ -2.11
BRD4O60885 AC135279.1-201ENST00000543493 504 ntBASIC1.88□□□□□ -2.11
BRD4O60885 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.88□□□□□ -2.11
BRD4O60885 AC004067.1-201ENST00000608733 700 ntBASIC1.88□□□□□ -2.11
BRD4O60885 AC092574.1-201ENST00000609771 420 ntBASIC1.88□□□□□ -2.11
BRD4O60885 AL589743.7-201ENST00000612637 233 ntBASIC1.88□□□□□ -2.11
BRD4O60885 AL138955.1-201ENST00000622881 1040 ntBASIC1.88□□□□□ -2.11
BRD4O60885 AL133216.2-202ENST00000634512 349 ntBASIC1.88□□□□□ -2.11
BRD4O60885 MKKS-204ENST00000639674 192 ntBASIC1.88□□□□□ -2.11
BRD4O60885 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
BRD4O60885 RNU1-22P-201ENST00000363334 158 ntBASIC1.87□□□□□ -2.11
BRD4O60885 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
BRD4O60885 RNU6-342P-201ENST00000384521 104 ntBASIC1.87□□□□□ -2.11
BRD4O60885 RNU6-140P-201ENST00000384566 108 ntBASIC1.87□□□□□ -2.11
BRD4O60885 RNU6-1257P-201ENST00000384625 110 ntBASIC1.87□□□□□ -2.11
BRD4O60885 RNU6-1000P-201ENST00000391066 106 ntBASIC1.87□□□□□ -2.11
BRD4O60885 RNU2-42P-201ENST00000410697 113 ntBASIC1.87□□□□□ -2.11
BRD4O60885 AC244636.1-201ENST00000421152 228 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms