Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNND1O60716 BNIP3P6-201ENST00000549284 499 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNND1O60716 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNND1O60716 RNU6-89P-201ENST00000606519 100 ntBASIC3.8□□□□□ -1.8
CTNND1O60716 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNND1O60716 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNND1O60716 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNND1O60716 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNND1O60716 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNND1O60716 AL035425.3-201ENST00000564206 4996 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 Y_RNA.231-201ENST00000364358 102 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 RNU6-434P-201ENST00000384376 107 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 MIR578-201ENST00000384828 96 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 MIR514A2-201ENST00000385131 88 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 MIR514A3-201ENST00000385132 88 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTNND1O60716 FGF7P8-201ENST00000402994 292 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 AL592114.1-201ENST00000403842 483 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 RNA5SP38-201ENST00000410750 119 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 ARL5AP1-201ENST00000418991 388 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 AL139413.1-201ENST00000421309 217 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 AL669831.1-202ENST00000428504 417 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 ERLEC1P1-201ENST00000433806 578 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 GTF2IP13-201ENST00000438487 386 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 RPS15AP27-201ENST00000449183 343 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 AC096576.1-201ENST00000489014 359 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 AC139453.3-201ENST00000493276 369 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNND1O60716 AC107934.2-201ENST00000518653 310 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNND1O60716 AC022080.3-201ENST00000544433 482 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNND1O60716 MIR5583-1-201ENST00000580941 59 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 U6.42-201ENST00000618440 107 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNND1O60716 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNND1O60716 AC005183.1-201ENST00000603687 1979 ntBASIC3.79□□□□□ -1.8
CTNND1O60716 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNND1O60716 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNND1O60716 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNND1O60716 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNND1O60716 MTND4P35-201ENST00000604257 1375 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTNND1O60716 RNU6-45P-201ENST00000384471 107 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 RNU6-332P-201ENST00000391193 108 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNND1O60716 RPL31P12-201ENST00000422587 358 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 RPL35AP12-201ENST00000425362 338 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.78□□□□□ -1.8
CTNND1O60716 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNND1O60716 HMGB3P8-201ENST00000449709 577 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNND1O60716 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 AL049830.2-201ENST00000480072 201 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 AC022493.1-201ENST00000492984 337 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNND1O60716 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.78□□□□□ -1.8
CTNND1O60716 AC009902.1-201ENST00000519351 183 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 AC078814.3-201ENST00000553036 491 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 TGIF1P1-201ENST00000558095 802 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 MIR4474-201ENST00000579189 78 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 AC060780.3-201ENST00000589464 80 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.78□□□□□ -1.8
CTNND1O60716 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNND1O60716 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNND1O60716 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.78□□□□□ -1.8
CTNND1O60716 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.77□□□□□ -1.81
CTNND1O60716 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CTNND1O60716 Y_RNA.157-201ENST00000363638 102 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 RNU6-82P-201ENST00000363970 107 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 Y_RNA.399-201ENST00000383955 105 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CTNND1O60716 SNORA16.2-201ENST00000390991 127 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 MIR888-201ENST00000401186 77 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 RNU6-1077P-201ENST00000410506 102 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 AC099548.1-201ENST00000421443 426 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.77□□□□□ -1.81
CTNND1O60716 RPL23AP82-202ENST00000427528 469 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CTNND1O60716 AL121601.2-201ENST00000438019 707 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CTNND1O60716 BRK1P2-201ENST00000442875 223 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 AL360271.2-201ENST00000447710 161 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.77□□□□□ -1.81
CTNND1O60716 AC006539.3-201ENST00000454258 129 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.77□□□□□ -1.81
CTNND1O60716 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.77□□□□□ -1.81
CTNND1O60716 CCDC34P1-201ENST00000507441 517 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.77□□□□□ -1.81
CTNND1O60716 AC008716.1-201ENST00000511084 513 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CTNND1O60716 AC008885.1-201ENST00000514930 301 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 SNORA31.1-201ENST00000515993 133 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 SNORA31.5-201ENST00000516190 133 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 AC025755.1-201ENST00000521306 278 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.77□□□□□ -1.81
CTNND1O60716 MIR4298-201ENST00000584380 73 ntBASIC3.77□□□□□ -1.81
CTNND1O60716 AL035413.2-201ENST00000604801 525 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms