Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC104260.1-201ENST00000616660 539 ntBASIC2.98□□□□□ -1.93
ZIC3O60481 AC009248.2-201ENST00000619826 254 ntBASIC2.98□□□□□ -1.93
ZIC3O60481 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.98□□□□□ -1.93
ZIC3O60481 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.98□□□□□ -1.93
ZIC3O60481 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ZIC3O60481 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.98□□□□□ -1.93
ZIC3O60481 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ZIC3O60481 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZIC3O60481 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
ZIC3O60481 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
ZIC3O60481 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZIC3O60481 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.97□□□□□ -1.93
ZIC3O60481 RNU6-831P-201ENST00000384548 107 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 SNORA1.3-201ENST00000384676 136 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 RPS4XP3-201ENST00000398541 413 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 FAT1P1-201ENST00000406588 507 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 RNU6-1025P-201ENST00000410629 104 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 RNU2-68P-201ENST00000410878 191 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 AL353621.1-201ENST00000418219 243 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 USP9YP20-201ENST00000419224 558 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.97□□□□□ -1.93
ZIC3O60481 HMGB3P11-201ENST00000440127 604 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 RPL12P25-201ENST00000455592 494 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.97□□□□□ -1.93
ZIC3O60481 MTND3P25-201ENST00000509243 135 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 HIGD1AP13-201ENST00000509878 289 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 AC008716.1-201ENST00000511084 513 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.97□□□□□ -1.93
ZIC3O60481 AC046134.1-201ENST00000514454 666 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.97□□□□□ -1.93
ZIC3O60481 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.97□□□□□ -1.93
ZIC3O60481 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.97□□□□□ -1.93
ZIC3O60481 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 HSPE1P7-201ENST00000604681 321 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 AC073657.2-201ENST00000605661 303 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.97□□□□□ -1.93
ZIC3O60481 U2.17-201ENST00000611454 95 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 AC025253.1-201ENST00000613623 543 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 AC099506.2-201ENST00000623074 221 ntBASIC2.97□□□□□ -1.93
ZIC3O60481 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ZIC3O60481 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZIC3O60481 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.97□□□□□ -1.93
ZIC3O60481 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZIC3O60481 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ZIC3O60481 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.93
ZIC3O60481 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.96□□□□□ -1.94
ZIC3O60481 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
ZIC3O60481 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.96□□□□□ -1.94
ZIC3O60481 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.96□□□□□ -1.94
ZIC3O60481 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
ZIC3O60481 RNU6-1303P-201ENST00000364841 107 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 Y_RNA.333-201ENST00000365274 102 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.96□□□□□ -1.94
ZIC3O60481 SNORA32.2-201ENST00000384049 122 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 RNU6-1035P-201ENST00000384477 107 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 Y_RNA.530-201ENST00000384587 101 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 MIR184-201ENST00000384962 84 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 EIF4E2P1-201ENST00000393781 255 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 AL357075.1-201ENST00000404107 726 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 AL078595.1-201ENST00000404458 226 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 RPS4XP7-201ENST00000406274 780 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 RNU6-607P-201ENST00000411283 108 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 RPLP0P7-201ENST00000416050 667 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 PDCL2P1-201ENST00000419302 352 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.96□□□□□ -1.94
ZIC3O60481 IFNA20P-201ENST00000436840 528 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.96□□□□□ -1.94
ZIC3O60481 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.96□□□□□ -1.94
ZIC3O60481 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.96□□□□□ -1.94
ZIC3O60481 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.96□□□□□ -1.94
ZIC3O60481 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.96□□□□□ -1.94
ZIC3O60481 AC110794.1-201ENST00000505816 425 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 AC006445.2-201ENST00000510061 472 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 AC114781.4-201ENST00000513707 639 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 RN7SKP256-201ENST00000517201 314 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.96□□□□□ -1.94
ZIC3O60481 AC090136.1-201ENST00000520009 240 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.96□□□□□ -1.94
ZIC3O60481 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.96□□□□□ -1.94
ZIC3O60481 TRAV37-201ENST00000553906 342 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 HMGB1P14-201ENST00000557424 591 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 MIR5680-201ENST00000577577 84 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 LRRC37A5P-203ENST00000580181 585 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ZIC3O60481 RMST_8.1-201ENST00000610287 165 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 U2.21-201ENST00000637295 81 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 MTND4P12-201ENST00000498999 1377 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 AC073346.2-201ENST00000624724 2058 ntBASIC2.96□□□□□ -1.94
ZIC3O60481 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.95□□□□□ -1.94
ZIC3O60481 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ZIC3O60481 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.95□□□□□ -1.94
ZIC3O60481 SNORD3E-201ENST00000362899 217 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 Y_RNA.166-201ENST00000363730 102 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ZIC3O60481 RNU6-1179P-201ENST00000384667 107 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ZIC3O60481 U3.19-201ENST00000390893 196 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 RNU6-510P-201ENST00000391239 108 ntBASIC2.95□□□□□ -1.94
ZIC3O60481 RNU2-3P-201ENST00000410144 191 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms