Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CALM1P1-201ENST00000442082 433 ntBASIC2.8□□□□□ -1.96
CUX2O14529 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.8□□□□□ -1.96
CUX2O14529 MTND4LP3-201ENST00000468320 276 ntBASIC2.8□□□□□ -1.96
CUX2O14529 RNU6-390P-201ENST00000516259 103 ntBASIC2.8□□□□□ -1.96
CUX2O14529 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.8□□□□□ -1.96
CUX2O14529 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.8□□□□□ -1.96
CUX2O14529 MTATP6P3-201ENST00000581686 676 ntBASIC2.8□□□□□ -1.96
CUX2O14529 AL391001.1-201ENST00000602747 715 ntBASIC2.8□□□□□ -1.96
CUX2O14529 AC013553.2-201ENST00000604244 589 ntBASIC2.8□□□□□ -1.96
CUX2O14529 AC072039.2-201ENST00000608883 439 ntBASIC2.8□□□□□ -1.96
CUX2O14529 MIR6078-201ENST00000611069 100 ntBASIC2.8□□□□□ -1.96
CUX2O14529 SNHG22-203ENST00000617833 660 ntBASIC2.8□□□□□ -1.96
CUX2O14529 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CUX2O14529 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CUX2O14529 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CUX2O14529 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CUX2O14529 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.8□□□□□ -1.96
CUX2O14529 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.8□□□□□ -1.96
CUX2O14529 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
CUX2O14529 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.79□□□□□ -1.96
CUX2O14529 ZNF876P-202ENST00000398732 1485 ntBASIC2.79□□□□□ -1.96
CUX2O14529 RNA5SP457-201ENST00000363657 124 ntBASIC2.79□□□□□ -1.96
CUX2O14529 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CUX2O14529 RPL17P12-201ENST00000413391 526 ntBASIC2.79□□□□□ -1.96
CUX2O14529 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CUX2O14529 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.79□□□□□ -1.96
CUX2O14529 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.79□□□□□ -1.96
CUX2O14529 AC092047.1-201ENST00000424997 240 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AL512844.2-201ENST00000433990 593 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AL583843.1-201ENST00000456070 346 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.79□□□□□ -1.96
CUX2O14529 AC091951.3-201ENST00000504093 246 ntBASIC2.79□□□□□ -1.96
CUX2O14529 CDC42P4-201ENST00000510507 563 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.79□□□□□ -1.96
CUX2O14529 RNU5A-4P-201ENST00000516588 111 ntBASIC2.79□□□□□ -1.96
CUX2O14529 RNA5SP291-201ENST00000517222 105 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.79□□□□□ -1.96
CUX2O14529 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.79□□□□□ -1.96
CUX2O14529 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.79□□□□□ -1.96
CUX2O14529 AC068135.2-201ENST00000569293 1028 ntBASIC2.79□□□□□ -1.96
CUX2O14529 MIR3935-201ENST00000583472 104 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AF038458.1-201ENST00000588406 262 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AL450336.1-201ENST00000605180 586 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AC009902.3-201ENST00000606235 2172 ntBASIC2.79□□□□□ -1.96
CUX2O14529 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AP000676.3-201ENST00000623299 569 ntBASIC2.79□□□□□ -1.96
CUX2O14529 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.79□□□□□ -1.96
CUX2O14529 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CUX2O14529 RNU6-157P-201ENST00000383957 107 ntBASIC2.78□□□□□ -1.96
CUX2O14529 RNU6-1035P-201ENST00000384477 107 ntBASIC2.78□□□□□ -1.96
CUX2O14529 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.78□□□□□ -1.96
CUX2O14529 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.78□□□□□ -1.96
CUX2O14529 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.78□□□□□ -1.96
CUX2O14529 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.78□□□□□ -1.96
CUX2O14529 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.78□□□□□ -1.96
CUX2O14529 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.78□□□□□ -1.96
CUX2O14529 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.78□□□□□ -1.96
CUX2O14529 RNU1-92P-201ENST00000517017 135 ntBASIC2.78□□□□□ -1.96
CUX2O14529 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.78□□□□□ -1.96
CUX2O14529 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.78□□□□□ -1.96
CUX2O14529 AC087465.1-201ENST00000560574 245 ntBASIC2.78□□□□□ -1.96
CUX2O14529 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.78□□□□□ -1.96
CUX2O14529 AC097468.3-201ENST00000607956 456 ntBASIC2.78□□□□□ -1.96
CUX2O14529 AL391262.2-201ENST00000622466 494 ntBASIC2.78□□□□□ -1.96
CUX2O14529 DUXAP9-208ENST00000622815 614 ntBASIC2.78□□□□□ -1.96
CUX2O14529 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CUX2O14529 AC007785.2-201ENST00000598627 1916 ntBASIC2.78□□□□□ -1.96
CUX2O14529 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CUX2O14529 RNU6-83P-201ENST00000384568 112 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AL359704.1-201ENST00000411586 781 ntBASIC2.77□□□□□ -1.97
CUX2O14529 HMGB1P49-201ENST00000418882 569 ntBASIC2.77□□□□□ -1.97
CUX2O14529 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.77□□□□□ -1.97
CUX2O14529 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.77□□□□□ -1.97
CUX2O14529 TXNL1P1-201ENST00000429528 554 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.77□□□□□ -1.97
CUX2O14529 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.77□□□□□ -1.97
CUX2O14529 ATG12P2-201ENST00000456830 416 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AMD1P1-201ENST00000457220 922 ntBASIC2.77□□□□□ -1.97
CUX2O14529 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.77□□□□□ -1.97
CUX2O14529 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.77□□□□□ -1.97
CUX2O14529 AC093809.1-201ENST00000509155 340 ntBASIC2.77□□□□□ -1.97
CUX2O14529 RNU1-40P-201ENST00000516816 164 ntBASIC2.77□□□□□ -1.97
CUX2O14529 RNU1-97P-201ENST00000516872 164 ntBASIC2.77□□□□□ -1.97
CUX2O14529 MTCO2P15-201ENST00000532655 656 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.77□□□□□ -1.97
CUX2O14529 AC245884.10-201ENST00000597355 337 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AC011458.1-201ENST00000604034 617 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AL161729.4-201ENST00000604650 476 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AC004852.3-201ENST00000614131 326 ntBASIC2.77□□□□□ -1.97
CUX2O14529 TUG1_2.1-201ENST00000614234 87 ntBASIC2.77□□□□□ -1.97
CUX2O14529 uc_338.12-201ENST00000616344 181 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AC090617.7-201ENST00000623952 126 ntBASIC2.77□□□□□ -1.97
CUX2O14529 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.77□□□□□ -1.97
CUX2O14529 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CUX2O14529 MIR1305-201ENST00000408300 86 ntBASIC2.77□□□□□ -1.97
CUX2O14529 RN7SKP266-201ENST00000410232 287 ntBASIC2.77□□□□□ -1.97
CUX2O14529 PIGPP2-201ENST00000411569 458 ntBASIC2.77□□□□□ -1.97
CUX2O14529 Z85995.1-201ENST00000415547 335 ntBASIC2.77□□□□□ -1.97
CUX2O14529 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.77□□□□□ -1.97
CUX2O14529 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms