Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 Y_RNA.445-201ENST00000384168 102 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRIM38O00635 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM38O00635 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM38O00635 SRIP2-201ENST00000428470 166 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 CALM2P2-201ENST00000428512 440 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 USP9YP16-201ENST00000430287 407 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 AC073063.1-201ENST00000434352 607 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM38O00635 USP9YP23-201ENST00000455085 407 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 RNU7-182P-201ENST00000459009 62 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 AC233702.1-201ENST00000482905 502 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM38O00635 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 RNA5SP290-201ENST00000517133 127 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 RANP9-201ENST00000519957 271 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 SUB1P1-201ENST00000524415 382 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 AC007458.1-201ENST00000542812 373 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 AC110588.1-201ENST00000559699 137 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 FRG2DP-202ENST00000566967 323 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 7SK.7-201ENST00000603504 247 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 AC012409.4-201ENST00000612923 249 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM38O00635 MTND4LP32-201ENST00000636111 270 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM38O00635 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM38O00635 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM38O00635 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM38O00635 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
TRIM38O00635 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM38O00635 API5P2-201ENST00000397055 1498 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 RNU6-639P-201ENST00000384074 107 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 RNU6-217P-201ENST00000384164 104 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 RNU2-9P-201ENST00000410194 145 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 RPS12P24-201ENST00000412619 387 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM38O00635 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM38O00635 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM38O00635 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM38O00635 AL591212.2-201ENST00000433923 257 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 HMGB3P11-201ENST00000440127 604 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM38O00635 SNORD105B-201ENST00000458770 79 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AL049830.2-201ENST00000480072 201 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 EIF4EP3-201ENST00000498782 656 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 CCDC34P1-201ENST00000507441 517 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 SNORD60.2-201ENST00000516883 86 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 Y_RNA.718-201ENST00000517110 102 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.62□□□□□ -1.83
TRIM38O00635 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM38O00635 AC026464.5-201ENST00000562497 722 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM38O00635 MIR3609-201ENST00000582661 80 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 MIR5195-201ENST00000583555 115 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.62□□□□□ -1.83
TRIM38O00635 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
TRIM38O00635 AC136601.2-201ENST00000604356 474 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AC080078.3-201ENST00000605407 463 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AC019193.3-201ENST00000609144 554 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 AC006111.3-201ENST00000622137 383 ntBASIC3.62□□□□□ -1.83
TRIM38O00635 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM38O00635 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM38O00635 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM38O00635 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM38O00635 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
TRIM38O00635 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 SNORD9-201ENST00000362566 104 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM38O00635 Y_RNA.401-201ENST00000383965 117 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 MIR325-201ENST00000385260 98 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 RNU6-308P-201ENST00000390957 107 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 AL136116.1-201ENST00000403591 381 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM38O00635 PMCHL1-202ENST00000423102 261 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AC097713.2-201ENST00000430199 356 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM38O00635 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM38O00635 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM38O00635 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM38O00635 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM38O00635 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM38O00635 FABP5P15-201ENST00000453566 214 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM38O00635 HMGN2P26-201ENST00000463169 339 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 GMFBP1-201ENST00000467831 427 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM38O00635 AC006445.2-201ENST00000510061 472 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AC098591.2-201ENST00000510152 315 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM38O00635 RNA5SP471-201ENST00000516971 106 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 RNU6-1137P-201ENST00000517073 99 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 Y_RNA.720-201ENST00000517166 92 ntBASIC3.61□□□□□ -1.83
TRIM38O00635 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM38O00635 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms