Protein–RNA interactions for Protein: K7ER74

APOC4-APOC2, APOC4-APOC2 readthrough (NMD candidate), humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2K7ER74 SNORA18.2-201ENST00000383865 132 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AL121978.1-201ENST00000402778 359 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AL591034.2-201ENST00000402839 359 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 C1DP1-201ENST00000426049 402 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AC092634.2-201ENST00000428146 1010 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 MTCO2P20-201ENST00000437339 673 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AC017099.1-201ENST00000448261 1028 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 COX7A2P2-201ENST00000505291 250 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 AC108706.1-201ENST00000611053 297 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 MIR8074-201ENST00000615081 81 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
APOC4-APOC2K7ER74 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.78□□□□□ -2.29
APOC4-APOC2K7ER74 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.78□□□□□ -2.29
APOC4-APOC2K7ER74 RBBP8P1-201ENST00000449447 1844 ntBASIC0.78□□□□□ -2.29
APOC4-APOC2K7ER74 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 RNY1P10-201ENST00000363268 113 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 MIR29C-201ENST00000385231 88 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 HMGN1P14-201ENST00000412459 517 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 NDUFS5P4-201ENST00000412983 318 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 PSMA6P3-201ENST00000428242 164 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC006512.1-201ENST00000468816 291 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC018437.1-201ENST00000492214 406 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 RPL22P13-201ENST00000493291 347 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AL133373.1-201ENST00000497098 94 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 OR5B19P-201ENST00000531766 928 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC125611.1-201ENST00000549563 229 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC091152.3-201ENST00000604227 325 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC004067.1-201ENST00000608733 700 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 MTND1P37-201ENST00000636562 264 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 Z75746.1-201ENST00000440243 2080 ntBASIC0.77□□□□□ -2.29
APOC4-APOC2K7ER74 AC233981.2-201ENST00000611524 1614 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 MIR515-2-201ENST00000384883 83 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 MIR515-1-201ENST00000384884 83 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC078974.1-201ENST00000411597 223 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC004941.2-201ENST00000427009 228 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 MTND1P18-201ENST00000448191 573 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 KATNBL1P6-201ENST00000453433 915 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC112492.4-201ENST00000456549 352 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 snoU13.9-201ENST00000458927 103 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC034244.1-201ENST00000507687 207 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 BNIP3P23-201ENST00000599655 511 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 AC016727.1-205ENST00000605437 569 ntBASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
APOC4-APOC2K7ER74 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 RNU1-23P-201ENST00000363361 144 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 RNU6-271P-201ENST00000363858 105 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 SNORA70.7-201ENST00000384159 133 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 MIR597-201ENST00000384968 97 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 RNU11-3P-201ENST00000391111 133 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 TRIM60P13-201ENST00000432350 1283 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AL135790.2-201ENST00000437701 267 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AC112198.4-201ENST00000515450 351 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 SNORA25.11-201ENST00000515935 105 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AC124293.1-201ENST00000530034 493 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AP003122.4-201ENST00000530980 758 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AC090115.3-201ENST00000553218 849 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 RN7SL622P-201ENST00000585292 275 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AL355802.3-201ENST00000607571 545 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 AL121890.5-201ENST00000620848 304 ntBASIC0.75□□□□□ -2.29
APOC4-APOC2K7ER74 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 RNU6-14P-201ENST00000384630 106 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 RNU6-77P-201ENST00000410554 91 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 PPP1R11P2-201ENST00000423543 382 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 SKA2P1-201ENST00000425592 390 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 RPL30P7-201ENST00000479312 323 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 RNU6-416P-201ENST00000516265 103 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 RNU7-40P-201ENST00000516397 64 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 SNORA48.9-201ENST00000516419 162 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 AC008015.1-201ENST00000555505 465 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 AC021739.1-201ENST00000559631 174 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 MIR3167-201ENST00000579623 85 ntBASIC0.74□□□□□ -2.29
APOC4-APOC2K7ER74 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms