Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 HIGD1AP1-201ENST00000550979 275 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC006077.1-201ENST00000604746 343 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 RNU6-85P-201ENST00000605989 107 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 Z69720.2-201ENST00000624755 279 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 MTND4P23-201ENST00000447723 1363 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AL672167.1-204ENST00000641875 3017 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 RNU6-1035P-201ENST00000384477 107 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AL391417.1-201ENST00000404100 426 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 RPL26P27-201ENST00000414397 437 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 MTCO2P27-201ENST00000420740 428 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC104472.2-201ENST00000469035 601 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 RPL27AP5-201ENST00000469428 449 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC096745.1-201ENST00000509945 370 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC092436.3-201ENST00000511788 257 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 RNU6-572P-201ENST00000516724 80 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 Y_RNA.718-201ENST00000517110 102 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC011602.1-201ENST00000546484 331 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 OR1M4P-201ENST00000589199 287 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AL033523.1-201ENST00000605153 153 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC126177.8-201ENST00000618339 1015 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AL137790.1-201ENST00000634283 177 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 AC099654.10-201ENST00000640395 161 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC85CA6NKD9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 FAM35BP-202ENST00000497389 3337 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 RNU1-108P-201ENST00000362556 161 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 SNORA54-201ENST00000384281 123 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 RNY4P36-201ENST00000391116 96 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 CKS1BP6-201ENST00000424932 240 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 CYCSP4-201ENST00000429682 331 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AC007677.1-201ENST00000445757 515 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AC021146.3-201ENST00000511911 260 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 MIR4524B-201ENST00000581569 115 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 NUTF2P8-201ENST00000604593 363 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 AC010378.1-201ENST00000619270 362 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 MIR7111-201ENST00000619751 72 ntBASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC85CA6NKD9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 ZNF962P-201ENST00000443465 3140 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 Y_RNA.259-201ENST00000364619 101 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 RNU6-328P-201ENST00000390887 106 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 RPS4XP3-201ENST00000398541 413 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AL354751.2-201ENST00000415471 210 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 EIF4EP1-201ENST00000422311 642 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AL590632.1-201ENST00000424289 371 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 RPL12P25-201ENST00000455592 494 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 RNA5SP310-201ENST00000459084 116 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 RPL9P32-201ENST00000464118 620 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AC116337.1-201ENST00000509680 687 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 RNU6-1016P-201ENST00000516689 94 ntBASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85CA6NKD9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms