Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AC092794.2-201ENST00000620933 563 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AC099506.2-201ENST00000623074 221 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AC022336.2-201ENST00000568966 2538 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 SNORA48.5-201ENST00000391143 135 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 EI24P2-201ENST00000397776 1076 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 RPS4XP7-201ENST00000406274 780 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 RNU4-47P-201ENST00000410876 114 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 POLHP1-201ENST00000411806 470 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC126124.2-201ENST00000413542 321 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC007390.1-201ENST00000415722 356 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AL158071.1-201ENST00000430315 461 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AL671855.1-201ENST00000446875 1203 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 MTND3P25-201ENST00000509243 135 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC010486.1-201ENST00000511793 424 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC025755.1-201ENST00000521306 278 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC090115.3-201ENST00000553218 849 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 HMGB1P14-201ENST00000557424 591 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 MIR5692A1-201ENST00000580523 69 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 MIR3609-201ENST00000582661 80 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 BNIP3P25-201ENST00000596023 559 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC092747.3-201ENST00000603769 301 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 RNVU1-4-201ENST00000612985 164 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AL136221.1-201ENST00000621449 509 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AC022418.1-201ENST00000624118 445 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 AP001148.1-201ENST00000624124 2359 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 ZNF826P-207ENST00000622273 1910 ntBASIC3.31□□□□□ -1.88
TBC1D3FA6NER0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 SNORD3E-201ENST00000362899 217 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 RNA5SP374-201ENST00000362939 125 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 RNU6-1303P-201ENST00000364841 107 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 Y_RNA.373-201ENST00000365600 103 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AC096664.2-201ENST00000411843 406 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AL645937.1-202ENST00000421799 937 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 PRPS1P1-201ENST00000445305 876 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 RNU7-167P-201ENST00000459160 62 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 RPL30P14-201ENST00000482744 348 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AC083904.1-201ENST00000487828 231 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AC008716.1-201ENST00000511084 513 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 RNU6-1314P-201ENST00000517139 104 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 MIR5004-201ENST00000579078 107 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AC005730.3-201ENST00000583067 366 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 VN1R80P-201ENST00000597126 338 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AC073657.2-201ENST00000605661 303 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 U2.17-201ENST00000611454 95 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 U6.42-201ENST00000618440 107 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 AC103705.1-201ENST00000619013 241 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 U2.21-201ENST00000637295 81 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 FAM35BP-202ENST00000497389 3337 ntBASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TBC1D3FA6NER0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 Y_RNA.72-201ENST00000362894 103 ntBASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 RNU6-867P-201ENST00000364956 107 ntBASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 RNA5SP219-201ENST00000390940 113 ntBASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.29□□□□□ -1.88
TBC1D3FA6NER0 AL353621.1-201ENST00000418219 243 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms