Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 Y_RNA.384-201ENST00000383909 102 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 SNORA32.2-201ENST00000384049 122 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RNU6-1127P-201ENST00000384580 107 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 Y_RNA.534-201ENST00000384599 112 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RNU6-331P-201ENST00000384724 107 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 MIR568-201ENST00000385036 95 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RNU2-33P-201ENST00000410344 192 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 Y_RNA.615-201ENST00000410769 117 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RN7SKP53-201ENST00000411337 315 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AL160275.3-201ENST00000423876 471 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC011742.1-201ENST00000431448 434 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC009237.8-201ENST00000445492 379 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 SCARNA18-201ENST00000459004 134 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RPS29P2-201ENST00000479278 136 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC027575.1-201ENST00000481064 460 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AL160314.1-201ENST00000490836 438 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RNU6-1170P-201ENST00000515974 106 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RNA5SP471-201ENST00000516971 106 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 Y_RNA.718-201ENST00000517110 102 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RNA5SP291-201ENST00000517222 105 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 NARSP2-201ENST00000518524 679 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AL163153.1-201ENST00000554223 283 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC090877.1-201ENST00000561418 344 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 MIR5583-1-201ENST00000580941 59 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 MIR3668-201ENST00000582138 75 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC006006.1-201ENST00000603082 144 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC098826.3-201ENST00000603823 466 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AL161798.1-201ENST00000604630 131 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AL627309.6-201ENST00000606857 840 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC011373.1-201ENST00000607270 237 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AC009570.1-201ENST00000609599 745 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 UBE3AP2-201ENST00000429033 2259 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.46□□□□□ -1.85
CCDC187A0A096LP49 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.46□□□□□ -1.85
CCDC187A0A096LP49 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 RNU6-82P-201ENST00000363970 107 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 RNU6-512P-201ENST00000364438 103 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 Y_RNA.459-201ENST00000384251 102 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 RNU6-831P-201ENST00000384548 107 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 RNU6-328P-201ENST00000390887 106 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 U3.19-201ENST00000390893 196 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 RNA5SP120-201ENST00000410900 112 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC113618.1-201ENST00000416747 285 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 PMCHL1-202ENST00000423102 261 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 RPS3AP52-201ENST00000435639 297 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AL356535.1-201ENST00000440335 398 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 SSXP4-201ENST00000451349 245 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AL136097.1-201ENST00000456945 913 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 MTND5P22-201ENST00000458380 195 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC007547.1-201ENST00000462177 490 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC008155.2-201ENST00000464337 397 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC069499.1-201ENST00000489433 509 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 CCDC34P1-201ENST00000507441 517 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 RNU6-143P-201ENST00000516942 93 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 RNU6-1231P-201ENST00000517185 103 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 COPS8P3-201ENST00000526024 482 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC026464.5-201ENST00000562497 722 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 FRG2DP-202ENST00000566967 323 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC106782.4-201ENST00000568264 210 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 MFSD8-236ENST00000641509 4050 ntBASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC187A0A096LP49 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC187A0A096LP49 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC187A0A096LP49 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms