Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AL356432.1-201ENST00000405809 419 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL160275.3-201ENST00000423876 471 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC005094.1-201ENST00000440420 368 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL161788.1-201ENST00000441805 169 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 FAM103A2P-201ENST00000444122 354 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 RPL23AP6-201ENST00000446637 472 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC108059.3-201ENST00000456388 214 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNA5SP281-201ENST00000516504 135 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 OR5AL2P-201ENST00000532185 920 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 DUXAP1-201ENST00000556632 463 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC243960.4-201ENST00000600532 288 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC068790.3-201ENST00000602988 553 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC104763.2-201ENST00000604179 382 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU4-5P-201ENST00000607255 135 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC022306.3-201ENST00000619930 550 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC243829.7-201ENST00000633081 225 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC010149.2-201ENST00000637608 315 ntBASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
COMMD3-BMI1R4GMX3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 UBE2L2-201ENST00000254302 429 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNA5SP289-201ENST00000362332 137 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU6-512P-201ENST00000364438 103 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU6-234P-201ENST00000365229 104 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU6-723P-201ENST00000383973 107 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNU6-278P-201ENST00000390945 109 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC106883.1-201ENST00000418805 562 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 ISCA1P1-201ENST00000426679 387 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC104651.1-201ENST00000427559 735 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 HMGB1P27-201ENST00000431429 603 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 MTCO2P20-201ENST00000437339 673 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 FABP5P15-201ENST00000453566 214 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 snoU109.1-201ENST00000459339 135 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC091965.2-201ENST00000512324 613 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 SNORA31.3-201ENST00000516029 96 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNA5SP200-201ENST00000516360 103 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 LINC00933-203ENST00000559812 219 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC090897.2-201ENST00000581715 130 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 MIR4298-201ENST00000584380 73 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC080013.3-201ENST00000606839 578 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL136981.2-201ENST00000617319 734 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 MIR6132-201ENST00000622083 109 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC091965.5-201ENST00000624785 342 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC006927.4-201ENST00000639187 543 ntBASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
COMMD3-BMI1R4GMX3 NACAP2-201ENST00000318548 624 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 SNORA40.19-201ENST00000390846 128 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 RNA5SP508-201ENST00000411327 119 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL158823.1-201ENST00000418441 478 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 RPL7P34-201ENST00000433316 712 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 RPL23AP35-201ENST00000451906 501 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC119751.4-201ENST00000507498 357 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 MTND2P7-201ENST00000521337 640 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 RPS3AP4-201ENST00000555161 764 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC073544.2-201ENST00000601155 540 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC112187.2-201ENST00000604345 283 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC106052.1-201ENST00000608029 497 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL157392.4-201ENST00000609756 345 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AL391834.2-201ENST00000609982 546 ntBASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
COMMD3-BMI1R4GMX3 AC006020.1-201ENST00000420179 1854 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms