Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 SNORA63.1-201ENST00000362493 131 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 Z98749.2-208ENST00000381646 500 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU2-3P-201ENST00000410144 191 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 RNA5SP44-201ENST00000410446 133 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 BX323014.1-201ENST00000412876 237 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 AC006026.2-201ENST00000457376 180 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 AC091153.1-201ENST00000466297 402 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 RN7SL330P-201ENST00000469709 307 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 SNORA70.18-201ENST00000516696 98 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 SNORD19.2-201ENST00000516978 73 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 IGHV3-76-201ENST00000522465 295 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 AC006199.1-201ENST00000548728 219 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 MIR4738-201ENST00000579134 87 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 MIR4801-201ENST00000582704 82 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 VN1R80P-201ENST00000597126 338 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A3BPQ9Y5P4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 Y_RNA.100-201ENST00000363141 102 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU6-384P-201ENST00000364900 104 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 Y_RNA.324-201ENST00000365165 102 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU6-898P-201ENST00000365627 104 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 U3.37-201ENST00000408528 213 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 U3.39-201ENST00000408569 239 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 RNA5SP31-201ENST00000411144 127 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 CYCSP33-201ENST00000414485 327 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 HMGN2P26-201ENST00000463169 339 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 RN7SL293P-201ENST00000481765 281 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 AC093663.1-201ENST00000497190 394 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 MIR3944-201ENST00000581277 108 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 BNIP3P22-201ENST00000593399 556 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 AL355877.2-201ENST00000603670 358 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 AC107294.3-201ENST00000609211 526 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 AP003355.3-201ENST00000623465 114 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 CDC27P3-201ENST00000635418 1910 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 MAPK10-362ENST00000641864 4484 ntBASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A3BPQ9Y5P4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
COL4A3BPQ9Y5P4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU6-266P-201ENST00000364225 107 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU6-1303P-201ENST00000364841 107 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 MIR183-201ENST00000384958 110 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU2-49P-201ENST00000410666 184 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC023141.4-201ENST00000412031 328 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 MTND1P23-201ENST00000416931 372 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 MTCO3P18-201ENST00000440206 761 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 RPL21P93-201ENST00000480465 489 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 RPS27P26-201ENST00000494583 239 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 PRDX4P1-201ENST00000507189 574 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 MTND4LP22-201ENST00000508209 276 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU2-27P-201ENST00000516185 142 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU6-358P-201ENST00000516564 75 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AL118558.2-201ENST00000556294 238 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AL133241.1-201ENST00000556832 487 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC010653.1-201ENST00000571108 881 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 MIR5047-201ENST00000579212 100 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC084757.4-201ENST00000616350 526 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC110079.1-202ENST00000635213 138 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 U6.105-201ENST00000637379 88 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 AC121333.1-201ENST00000567488 2709 ntBASIC3.96□□□□□ -1.78
COL4A3BPQ9Y5P4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A3BPQ9Y5P4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms