Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RPS15AP27-201ENST00000449183 343 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 HMGB3P22-202ENST00000451823 572 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 TRBV1-201ENST00000476502 284 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 RPS27P27-201ENST00000498779 255 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 HIGD1AP13-201ENST00000509878 289 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AC093303.1-201ENST00000514549 295 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 RNU6-390P-201ENST00000516259 103 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 RNU6-1231P-201ENST00000517185 103 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 COPS8P3-201ENST00000526024 482 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AC093012.1-202ENST00000549403 582 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AL121576.1-201ENST00000556055 276 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AL138889.2-201ENST00000603883 242 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 CYP2C61P-201ENST00000604072 290 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AL158032.1-201ENST00000605401 106 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 BRDTP1-201ENST00000605735 677 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AC008121.3-201ENST00000618726 433 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AC103705.1-201ENST00000619013 241 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 MIR7975-201ENST00000619350 68 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 AL137003.2-201ENST00000606924 2538 ntBASIC4.18□□□□□ -1.74
CTDP1Q9Y5B0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 Y_RNA.145-201ENST00000363527 102 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 Y_RNA.197-201ENST00000364004 102 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 MIR135A2-201ENST00000384854 100 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 NDUFS5P1-201ENST00000405668 289 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 SSXP4-201ENST00000451349 245 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AC069499.1-201ENST00000489433 509 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 RNU6-123P-201ENST00000516163 102 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 RN7SKP209-201ENST00000516888 304 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 RPL23AP84-201ENST00000571193 464 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AC138761.3-201ENST00000579993 334 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AC012669.1-201ENST00000603209 283 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AL670379.10-201ENST00000604330 253 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AL161756.2-201ENST00000604597 246 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AL670379.9-201ENST00000605428 253 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AC012409.4-201ENST00000612923 249 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AC244517.12-201ENST00000623581 663 ntBASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDP1Q9Y5B0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 MAPK10-362ENST00000641864 4484 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 Y_RNA.395-201ENST00000383945 109 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 RNVU1-14-201ENST00000384770 164 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 RNA5SP111-201ENST00000411386 101 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 CYCSP4-201ENST00000429682 331 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 MRPS31P2-201ENST00000451581 518 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 Y_RNA.653-201ENST00000459091 95 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 IGHV3-76-201ENST00000522465 295 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 IMMP1LP2-201ENST00000552954 492 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 MIR3186-201ENST00000577404 85 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 MIR5690-201ENST00000583739 73 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC023043.2-201ENST00000589678 1026 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC008737.2-201ENST00000599446 118 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC006077.1-201ENST00000604746 343 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC019193.3-201ENST00000609144 554 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 U2.17-201ENST00000611454 95 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AL355365.1-201ENST00000616480 294 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AL360181.4-201ENST00000621752 134 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC007998.5-201ENST00000622938 237 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 AC073346.2-201ENST00000624724 2058 ntBASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTDP1Q9Y5B0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 360.1 ms