Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 AC087588.1-201ENST00000462203 316 ntBASIC-0.18□□□□□ -2.44
Q9Y3F1 COX6CP6-201ENST00000490840 228 ntBASIC-0.18□□□□□ -2.44
Q9Y3F1 AC011406.1-201ENST00000512440 370 ntBASIC-0.18□□□□□ -2.44
Q9Y3F1 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.18□□□□□ -2.44
Q9Y3F1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC-0.18□□□□□ -2.44
Q9Y3F1 AL355877.2-201ENST00000603670 358 ntBASIC-0.18□□□□□ -2.44
Q9Y3F1 AC007038.2-201ENST00000608095 740 ntBASIC-0.18□□□□□ -2.44
Q9Y3F1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
Q9Y3F1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
Q9Y3F1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Q9Y3F1 OR5H6-203ENST00000642105 978 ntBASIC-0.18□□□□□ -2.44
Q9Y3F1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC-0.18□□□□□ -2.44
Q9Y3F1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC-0.19□□□□□ -2.44
Q9Y3F1 RNU6V-201ENST00000384105 107 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 RPS3AP24-201ENST00000407896 734 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 AC092634.6-201ENST00000418558 192 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC-0.19□□□□□ -2.44
Q9Y3F1 ELOCP6-201ENST00000429066 328 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 RPL37P21-201ENST00000435890 276 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 ELOCP12-201ENST00000458706 328 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 AC010301.1-201ENST00000473936 355 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 RPL30P11-201ENST00000495304 339 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 MTCO2P32-201ENST00000514865 403 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 RNA5SP476-201ENST00000516613 103 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 AC023050.2-201ENST00000544968 387 ntBASIC-0.19□□□□□ -2.44
Q9Y3F1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.19□□□□□ -2.44
Q9Y3F1 RNU6-923P-201ENST00000364753 107 ntBASIC-0.2□□□□□ -2.44
Q9Y3F1 RNU4-45P-201ENST00000365469 141 ntBASIC-0.2□□□□□ -2.44
Q9Y3F1 RNU6-945P-201ENST00000383947 107 ntBASIC-0.2□□□□□ -2.44
Q9Y3F1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC-0.2□□□□□ -2.44
Q9Y3F1 AL135790.2-201ENST00000437701 267 ntBASIC-0.2□□□□□ -2.44
Q9Y3F1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC-0.2□□□□□ -2.44
Q9Y3F1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.2□□□□□ -2.44
Q9Y3F1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.2□□□□□ -2.44
Q9Y3F1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC-0.2□□□□□ -2.44
Q9Y3F1 Y_RNA.67-201ENST00000362870 100 ntBASIC-0.21□□□□□ -2.44
Q9Y3F1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC-0.21□□□□□ -2.44
Q9Y3F1 HMGB3P31-201ENST00000413333 595 ntBASIC-0.21□□□□□ -2.44
Q9Y3F1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.21□□□□□ -2.44
Q9Y3F1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC-0.21□□□□□ -2.44
Q9Y3F1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC-0.21□□□□□ -2.44
Q9Y3F1 AC114982.1-201ENST00000469402 321 ntBASIC-0.21□□□□□ -2.44
Q9Y3F1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.21□□□□□ -2.44
Q9Y3F1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.21□□□□□ -2.44
Q9Y3F1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC-0.21□□□□□ -2.44
Q9Y3F1 MIR4713-201ENST00000582691 75 ntBASIC-0.21□□□□□ -2.44
Q9Y3F1 LLPHP1-201ENST00000603571 367 ntBASIC-0.21□□□□□ -2.44
Q9Y3F1 AC110792.4-201ENST00000609843 298 ntBASIC-0.21□□□□□ -2.44
Q9Y3F1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC-0.21□□□□□ -2.44
Q9Y3F1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Q9Y3F1 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Q9Y3F1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
Q9Y3F1 RNU6-105P-201ENST00000363909 104 ntBASIC-0.22□□□□□ -2.44
Q9Y3F1 SNORA4.3-201ENST00000365564 137 ntBASIC-0.22□□□□□ -2.44
Q9Y3F1 SNORA8-201ENST00000384574 139 ntBASIC-0.22□□□□□ -2.44
Q9Y3F1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Q9Y3F1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Q9Y3F1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
Q9Y3F1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC-0.22□□□□□ -2.44
Q9Y3F1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.22□□□□□ -2.44
Q9Y3F1 MIR3678-201ENST00000578455 94 ntBASIC-0.22□□□□□ -2.44
Q9Y3F1 BNIP3P25-201ENST00000596023 559 ntBASIC-0.22□□□□□ -2.44
Q9Y3F1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC-0.22□□□□□ -2.44
Q9Y3F1 AC023934.1-201ENST00000574529 2389 ntBASIC-0.22□□□□□ -2.44
Q9Y3F1 CCT4P2-201ENST00000233836 1548 ntBASIC-0.23□□□□□ -2.45
Q9Y3F1 RPL21P111-201ENST00000418453 477 ntBASIC-0.23□□□□□ -2.45
Q9Y3F1 PDCL2P1-201ENST00000419302 352 ntBASIC-0.23□□□□□ -2.45
Q9Y3F1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.23□□□□□ -2.45
Q9Y3F1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC-0.23□□□□□ -2.45
Q9Y3F1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.23□□□□□ -2.45
Q9Y3F1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.23□□□□□ -2.45
Q9Y3F1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC-0.23□□□□□ -2.45
Q9Y3F1 AC022254.1-201ENST00000567857 235 ntBASIC-0.23□□□□□ -2.45
Q9Y3F1 SNRPGP15-201ENST00000600149 222 ntBASIC-0.23□□□□□ -2.45
Q9Y3F1 SDAD1P2-201ENST00000441308 2028 ntBASIC-0.23□□□□□ -2.45
Q9Y3F1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
Q9Y3F1 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 RNU6-302P-201ENST00000365249 107 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 TRAPPC2P4-201ENST00000421750 331 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 CST2P1-201ENST00000425770 87 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 AL645638.1-201ENST00000440519 361 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 AC108740.1-201ENST00000498629 225 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
Q9Y3F1 AC141557.1-201ENST00000540982 400 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 MIR5571-201ENST00000577998 113 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 MIR5589-201ENST00000579442 60 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 MIR4636-201ENST00000582271 80 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 Z98751.3-201ENST00000604447 521 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 AL356585.4-201ENST00000623078 1229 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 AC092192.1-201ENST00000633154 1018 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 TPTE2P4-201ENST00000258589 1605 ntBASIC-0.24□□□□□ -2.45
Q9Y3F1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
Q9Y3F1 RNA5SP264-201ENST00000363115 107 ntBASIC-0.25□□□□□ -2.45
Q9Y3F1 TRAPPC2P8-201ENST00000440676 396 ntBASIC-0.25□□□□□ -2.45
Q9Y3F1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.25□□□□□ -2.45
Q9Y3F1 AC121161.1-201ENST00000510606 652 ntBASIC-0.25□□□□□ -2.45
Q9Y3F1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.25□□□□□ -2.45
Q9Y3F1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
Q9Y3F1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms