Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC074117.2-201ENST00000417130 397 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 AC005002.2-201ENST00000438228 269 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 AC007969.2-201ENST00000441891 191 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RPL21P104-201ENST00000464143 478 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RN7SKP49-201ENST00000516675 260 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNU6-1198P-201ENST00000516904 67 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 AK6P2-201ENST00000549020 471 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 AC037487.3-201ENST00000606668 112 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 CR381572.2-201ENST00000624852 397 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AC079741.1-201ENST00000321498 212 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 Y_RNA.150-201ENST00000363562 102 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 RNA5SP167-201ENST00000365461 116 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 RNU6-326P-201ENST00000365480 107 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 Y_RNA.504-201ENST00000384481 104 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 SNORA70.10-201ENST00000384515 134 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 MIR141-201ENST00000384975 95 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 Y_RNA.793-201ENST00000411222 111 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 NDUFB4P10-201ENST00000452541 359 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 Y_RNA.644-201ENST00000459006 113 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AC091874.1-201ENST00000511402 339 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 Y_RNA.674-201ENST00000516362 113 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 RNA5SP360-201ENST00000516555 118 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 RAB9BP1-201ENST00000519581 626 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AP004242.1-201ENST00000533701 349 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 NACAP3-201ENST00000552100 481 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 MIR5571-201ENST00000577998 113 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AL512605.2-201ENST00000592972 256 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AC020895.1-201ENST00000595362 272 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 SNORA43.4-201ENST00000629559 138 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 OR14L1P-202ENST00000641545 3009 ntBASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD3Q9UJU5 AC006971.1-201ENST00000407916 4486 ntBASIC4.4□□□□□ -1.7
FOXD3Q9UJU5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXD3Q9UJU5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXD3Q9UJU5 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
FOXD3Q9UJU5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXD3Q9UJU5 AC126323.6-202ENST00000568092 3511 ntBASIC4.4□□□□□ -1.7
FOXD3Q9UJU5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
FOXD3Q9UJU5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXD3Q9UJU5 Y_RNA.44-201ENST00000362676 108 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 SNORD56.1-201ENST00000362913 68 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 RNU6-884P-201ENST00000363889 107 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 Y_RNA.319-201ENST00000365138 92 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 RNU6-378P-201ENST00000384324 107 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 RNA5SP129-201ENST00000410276 118 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 SNORD12B-201ENST00000410433 91 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 OR4C10P-201ENST00000434991 931 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AC011753.3-201ENST00000443436 406 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AC073264.2-201ENST00000448886 166 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 SSXP4-201ENST00000451349 245 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AC009220.1-201ENST00000451614 275 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AC016632.1-201ENST00000503994 196 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AC027288.2-201ENST00000553028 243 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AL138963.2-201ENST00000605137 226 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 AL672167.1-204ENST00000641875 3017 ntBASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
FOXD3Q9UJU5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 AC018529.3-201ENST00000624212 2254 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 Y_RNA.199-201ENST00000364014 102 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 RNU6-1141P-201ENST00000364520 107 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms