Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 RNU4-47P-201ENST00000410876 114 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC092809.3-201ENST00000415453 231 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 USP9YP8-201ENST00000441913 500 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 PMCHL2-203ENST00000457791 237 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC091951.2-201ENST00000500762 203 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC008549.1-201ENST00000512900 643 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC114781.4-201ENST00000513707 639 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 RNU4-29P-201ENST00000515943 174 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-123P-201ENST00000516163 102 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 Y_RNA.689-201ENST00000516589 107 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AL355836.1-201ENST00000555951 870 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 MIR5583-1-201ENST00000580941 59 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 MIR4506-201ENST00000584693 77 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC008521.1-201ENST00000587471 187 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AL158032.1-201ENST00000605401 106 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 LARP7P1-201ENST00000605576 316 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC104260.1-201ENST00000616660 539 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC007998.5-201ENST00000622938 237 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC099506.2-201ENST00000623074 221 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC100810.6-201ENST00000638068 285 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC108206.1-201ENST00000570186 4159 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AP003122.5-201ENST00000527668 3766 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AL139276.1-201ENST00000311910 1001 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 RPL9P7-201ENST00000330965 580 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-1287P-201ENST00000362914 107 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 SNORA54-201ENST00000384281 123 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-1060P-201ENST00000384664 107 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 SNORD15B-201ENST00000384714 146 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AL606923.1-201ENST00000406616 190 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 RNU2-29P-201ENST00000410423 189 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 YPEL5P1-201ENST00000419731 367 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC098614.3-201ENST00000438957 440 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 RN7SL807P-201ENST00000470923 297 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 HMGN1P12-201ENST00000499125 195 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC117522.3-201ENST00000507974 584 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 RN7SKP258-201ENST00000517151 304 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC023050.3-201ENST00000541142 333 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 BDH2P1-201ENST00000602288 736 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC130324.3-201ENST00000614165 542 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AL110115.1-201ENST00000614396 364 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 Y_RNA.804-201ENST00000615262 101 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AP001486.3-201ENST00000615334 372 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 AC010733.2-201ENST00000589496 5702 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 MTND4P12-201ENST00000498999 1377 ntBASIC3.11□□□□□ -1.91
SMARCAL1Q9NZC9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 SNORA38.1-201ENST00000364172 131 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 Y_RNA.279-201ENST00000364763 95 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 RNU4-66P-201ENST00000365199 138 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-116P-201ENST00000384042 109 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 MIR514A1-201ENST00000385133 98 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 AL139397.2-201ENST00000404529 772 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 RNA5SP118-201ENST00000410385 109 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 AL451054.2-201ENST00000420896 202 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 RPL7L1P10-201ENST00000427790 463 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 AC006946.1-201ENST00000429106 328 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 BX510359.1-201ENST00000456973 237 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 RPS29P2-201ENST00000479278 136 ntBASIC3.1□□□□□ -1.91
SMARCAL1Q9NZC9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms