Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VTA1Q9NP79 Y_RNA.529-201ENST00000384586 119 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 SNORA1.3-201ENST00000384676 136 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.99□□□□□ -1.77
VTA1Q9NP79 NDUFB4P5-201ENST00000415445 361 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AL139396.1-201ENST00000421137 167 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AL353678.1-201ENST00000422735 741 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AL512844.2-201ENST00000433990 593 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 SNRPEP9-201ENST00000436794 238 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 BRK1P2-201ENST00000442875 223 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 MRPL50P4-201ENST00000446432 475 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.99□□□□□ -1.77
VTA1Q9NP79 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.99□□□□□ -1.77
VTA1Q9NP79 SNORA70.14-201ENST00000516205 110 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 RN7SKP57-201ENST00000517248 293 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AC026464.5-201ENST00000562497 722 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AL645944.1-201ENST00000603857 493 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AL355598.1-201ENST00000604169 202 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
VTA1Q9NP79 U7.8-201ENST00000619968 63 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 SNORD39.4-201ENST00000620099 78 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AL031601.2-202ENST00000622650 282 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 AC099506.2-201ENST00000623074 221 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 TNPO1P3-201ENST00000436471 2662 ntBASIC3.99□□□□□ -1.77
VTA1Q9NP79 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.98□□□□□ -1.77
VTA1Q9NP79 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VTA1Q9NP79 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VTA1Q9NP79 RNU4-73P-201ENST00000363164 141 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 RNU4-76P-201ENST00000364509 141 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VTA1Q9NP79 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VTA1Q9NP79 MIR578-201ENST00000384828 96 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 MIR450B-201ENST00000401182 78 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 FAT1P1-201ENST00000406588 507 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VTA1Q9NP79 RN7SKP111-201ENST00000410349 271 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 RNU6-1025P-201ENST00000410629 104 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 AL159169.1-201ENST00000421119 127 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.98□□□□□ -1.77
VTA1Q9NP79 AC005300.1-201ENST00000428401 373 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 SNAP23P1-201ENST00000433229 246 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.98□□□□□ -1.77
VTA1Q9NP79 CYCSP32-201ENST00000440548 321 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.98□□□□□ -1.77
VTA1Q9NP79 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.98□□□□□ -1.77
VTA1Q9NP79 RNU6-256P-201ENST00000516747 97 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.98□□□□□ -1.77
VTA1Q9NP79 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.98□□□□□ -1.77
VTA1Q9NP79 AC023043.2-201ENST00000589678 1026 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 CTHRC1P1-201ENST00000605383 469 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 AC103710.3-201ENST00000608157 948 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.98□□□□□ -1.77
VTA1Q9NP79 RMST_7.1-201ENST00000621935 268 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 AC027309.3-201ENST00000623419 351 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 AL732372.2-225ENST00000642124 456 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 AL353746.1-201ENST00000566293 6881 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 ZNF807-201ENST00000328088 1707 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VTA1Q9NP79 MFSD8-233ENST00000641482 4860 ntBASIC3.98□□□□□ -1.77
VTA1Q9NP79 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VTA1Q9NP79 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 OTUD4P1-201ENST00000237841 3067 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VTA1Q9NP79 RNU6-217P-201ENST00000384164 104 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 RNU6-140P-201ENST00000384566 108 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 U3.19-201ENST00000390893 196 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 AL360182.1-201ENST00000397433 468 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 Z92545.1-201ENST00000411782 234 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 RPS20P15-201ENST00000412792 311 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 YPEL5P1-201ENST00000419731 367 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 AC017083.1-201ENST00000428093 483 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 SNRPEP4-201ENST00000435815 279 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 AC093663.1-201ENST00000497190 394 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 AC009901.1-201ENST00000506703 541 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 RPL39P5-202ENST00000512505 151 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 TRAV37-201ENST00000553906 342 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 AC100830.2-201ENST00000581636 240 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 AC073539.2-201ENST00000597113 165 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 ATP1B3P1-201ENST00000605365 821 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 BRDTP1-201ENST00000605735 677 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 uc_338.15-201ENST00000615470 191 ntBASIC3.97□□□□□ -1.77
VTA1Q9NP79 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VTA1Q9NP79 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VTA1Q9NP79 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VTA1Q9NP79 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.96□□□□□ -1.77
VTA1Q9NP79 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.96□□□□□ -1.77
VTA1Q9NP79 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.96□□□□□ -1.78
VTA1Q9NP79 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VTA1Q9NP79 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VTA1Q9NP79 FRG1CP-201ENST00000358464 769 ntBASIC3.96□□□□□ -1.78
VTA1Q9NP79 Y_RNA.384-201ENST00000383909 102 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms