Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSU72Q9NP77 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSU72Q9NP77 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSU72Q9NP77 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSU72Q9NP77 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSU72Q9NP77 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSU72Q9NP77 RNA5SP191-201ENST00000362585 102 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 RNU6-227P-201ENST00000362865 103 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 Y_RNA.200-201ENST00000364018 102 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 Y_RNA.245-201ENST00000364493 95 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 RNU6-336P-201ENST00000364891 107 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 RNU6-187P-201ENST00000384139 106 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 MIR3065-201ENST00000390137 79 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 MTCO2P33-201ENST00000402100 465 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 RPS12P10-201ENST00000427031 377 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 AL160314.1-201ENST00000490836 438 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 RN7SL812P-201ENST00000493791 279 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 OR7H2P-201ENST00000513483 306 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 RNU6-1012P-201ENST00000516606 109 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 SNORA31.19-201ENST00000517079 126 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 MED28P6-201ENST00000558776 231 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 MIR3910-1-201ENST00000580936 111 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 MIR3176-201ENST00000582210 90 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 AC060766.3-201ENST00000591442 263 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 MIR6853-201ENST00000619642 74 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 AC127459.3-201ENST00000624328 466 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 AL355480.1-201ENST00000629041 99 ntBASIC4.34□□□□□ -1.71
SSU72Q9NP77 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.34□□□□□ -1.71
SSU72Q9NP77 AL592437.2-201ENST00000421655 2434 ntBASIC4.34□□□□□ -1.72
SSU72Q9NP77 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SSU72Q9NP77 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
SSU72Q9NP77 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.33□□□□□ -1.72
SSU72Q9NP77 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSU72Q9NP77 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSU72Q9NP77 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSU72Q9NP77 RNA5SP123-201ENST00000363244 119 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 Y_RNA.123-201ENST00000363338 102 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RNU6-173P-201ENST00000364215 104 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RN7SKP15-201ENST00000364742 309 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RNU6-171P-201ENST00000384354 107 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RNU6-102P-201ENST00000384485 104 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.33□□□□□ -1.72
SSU72Q9NP77 MIR1298-201ENST00000408783 112 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RPS12P23-201ENST00000419579 400 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 NDUFB4P7-201ENST00000423198 363 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 CHEK2P5-201ENST00000423877 246 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 Z82188.1-201ENST00000436709 154 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 AC144530.1-201ENST00000452862 555 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RNU7-87P-201ENST00000459343 62 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RN7SL174P-201ENST00000475578 289 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.33□□□□□ -1.72
SSU72Q9NP77 MLLT10P2-201ENST00000506434 249 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 AC010265.1-201ENST00000513509 211 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 AC010186.2-204ENST00000537668 439 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 CBX3P4-201ENST00000538909 354 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 AL360157.1-201ENST00000565962 87 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.33□□□□□ -1.72
SSU72Q9NP77 AL645944.1-201ENST00000603857 493 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RNA5SP108-201ENST00000605921 117 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 AC240442.1-201ENST00000616055 283 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 LINC00901.1-201ENST00000617252 152 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 U4.7-201ENST00000638126 106 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.33□□□□□ -1.72
SSU72Q9NP77 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSU72Q9NP77 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.33□□□□□ -1.72
SSU72Q9NP77 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSU72Q9NP77 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.33□□□□□ -1.72
SSU72Q9NP77 MFSD8-242ENST00000641690 4199 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 AC093535.2-201ENST00000624769 2326 ntBASIC4.33□□□□□ -1.72
SSU72Q9NP77 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSU72Q9NP77 RN7SKP224-201ENST00000364140 325 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 RNA5SP513-201ENST00000364648 118 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSU72Q9NP77 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 EIF4A1P3-201ENST00000411521 244 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 AL138752.1-201ENST00000452964 351 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 RPL23AP24-201ENST00000458203 385 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC092798.1-201ENST00000458542 409 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 MED28P2-201ENST00000475771 317 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.32□□□□□ -1.72
SSU72Q9NP77 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.32□□□□□ -1.72
SSU72Q9NP77 ANXA2P1-201ENST00000505539 926 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 RNU6-496P-201ENST00000516145 99 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 SCARNA24.2-201ENST00000516968 130 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.32□□□□□ -1.72
SSU72Q9NP77 AP004371.1-201ENST00000525240 214 ntBASIC4.32□□□□□ -1.72
SSU72Q9NP77 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms