Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC112673.1-201ENST00000513168 575 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 RNA5SP216-201ENST00000516111 123 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 RN7SKP265-201ENST00000516448 223 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AL133153.1-201ENST00000557756 303 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AL354943.1-201ENST00000572103 781 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 MIR5007-201ENST00000583098 95 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 MIR4760-201ENST00000585040 80 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AC234772.3-201ENST00000602277 528 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AP000240.1-201ENST00000609910 452 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 AC007490.1-201ENST00000624321 703 ntBASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
TM9SF3Q9HD45 MTND5P33-201ENST00000571250 1450 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 MIR21-201ENST00000362134 72 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 RNA5SP88-201ENST00000365560 109 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC104651.1-201ENST00000427559 735 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 SNORD11.1-201ENST00000459482 85 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 LINC00888-204ENST00000487386 421 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 MTCYBP20-201ENST00000524239 1129 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 MTND1P24-201ENST00000552175 861 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 SNRPGP18-201ENST00000553000 214 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC136618.2-201ENST00000575091 400 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC007229.1-201ENST00000590455 412 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC105148.1-201ENST00000604961 409 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 RNU6-88P-201ENST00000606801 100 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AC009090.3-201ENST00000616553 565 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AL031601.2-202ENST00000622650 282 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 AP002782.1-201ENST00000623107 614 ntBASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TM9SF3Q9HD45 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.28□□□□□ -2.05
TM9SF3Q9HD45 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 RNA5SP240-201ENST00000365355 128 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 RNU6-769P-201ENST00000384407 104 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 MIR764-201ENST00000390811 85 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 RN7SKP266-201ENST00000410232 287 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AL359704.1-201ENST00000411586 781 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 MTND1P23-201ENST00000416931 372 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AL591806.2-201ENST00000433122 173 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 GPM6BP3-201ENST00000442797 145 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AL031659.1-201ENST00000447075 539 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 DEFB122-202ENST00000569013 197 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 MIR3126-201ENST00000577443 74 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 DPPA3P3-201ENST00000603842 430 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC018714.1-201ENST00000605028 208 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC072039.2-201ENST00000608883 439 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AL391813.2-201ENST00000609113 322 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AL136313.1-201ENST00000624804 202 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC092192.1-201ENST00000633154 1018 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 AC007671.2-201ENST00000637344 619 ntBASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TM9SF3Q9HD45 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 UBE2L2-201ENST00000254302 429 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 AL391994.1-201ENST00000254724 282 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 NACAP2-201ENST00000318548 624 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 Y_RNA.302-201ENST00000364997 102 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 RNU1-51P-201ENST00000365345 176 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 RNU1-148P-201ENST00000384472 162 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 MIR19A-201ENST00000384878 82 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 HMGB1P11-201ENST00000413899 637 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 AL354941.1-201ENST00000438600 464 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 AL591719.1-201ENST00000444669 744 ntBASIC2.26□□□□□ -2.05
TM9SF3Q9HD45 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms