Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 NDUFB4P5-201ENST00000415445 361 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AL109913.1-201ENST00000421173 514 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AL139413.1-201ENST00000421309 217 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AL356867.1-201ENST00000429623 299 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AL591212.2-201ENST00000433923 257 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 RNU6-953P-201ENST00000459154 107 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 snoU13.22-201ENST00000459428 104 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 RPL21P41-201ENST00000459863 264 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AC104472.2-201ENST00000469035 601 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 SCARNA15.2-201ENST00000516409 127 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 RN7SKP57-201ENST00000517248 293 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AC010525.2-201ENST00000590920 195 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 BNIP3P30-201ENST00000601184 574 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 RMST_3.1-201ENST00000611651 109 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 MIR8057-201ENST00000620957 69 ntBASIC3.09□□□□□ -1.91
PCDH9Q9HC56 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDH9Q9HC56 MTND4P14-201ENST00000435799 1354 ntBASIC3.09□□□□□ -1.92
PCDH9Q9HC56 AL354685.2-201ENST00000448218 1447 ntBASIC3.09□□□□□ -1.92
PCDH9Q9HC56 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AL137003.2-201ENST00000606924 2538 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 UBE2L2-201ENST00000254302 429 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 RNU6-512P-201ENST00000364438 103 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 RNY3P14-201ENST00000384309 102 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 CISD1P1-201ENST00000393907 327 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AL139039.1-201ENST00000401900 692 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AL606923.1-201ENST00000406616 190 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 RPS12P24-201ENST00000412619 387 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 RPL30P16-201ENST00000419341 429 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 RPL37P6-201ENST00000460682 294 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 TTC39CP1-201ENST00000512513 755 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC025465.4-201ENST00000513422 638 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 RNU6-358P-201ENST00000516564 75 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 SUB1P1-201ENST00000524415 382 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC022690.1-201ENST00000526681 550 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AP005435.4-201ENST00000529514 284 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC022893.3-201ENST00000607665 437 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC090132.2-201ENST00000615881 347 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC009033.1-201ENST00000624279 431 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 MTND5P42-201ENST00000637720 498 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 AC099654.14-201ENST00000638599 341 ntBASIC3.08□□□□□ -1.92
PCDH9Q9HC56 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDH9Q9HC56 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 MAPK10-322ENST00000641485 4530 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AC008568.2-201ENST00000623862 2313 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 RNU4-66P-201ENST00000365199 138 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 Y_RNA.333-201ENST00000365274 102 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AL139397.2-201ENST00000404529 772 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 MIR1290-201ENST00000408735 78 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 RNU2-29P-201ENST00000410423 189 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDH9Q9HC56 SNRPFP3-201ENST00000457792 225 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 RPS29P2-201ENST00000479278 136 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AC018710.1-201ENST00000506509 158 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 AC074344.1-201ENST00000512823 224 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 SNORA31.3-201ENST00000516029 96 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 RNU6-927P-201ENST00000516199 100 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 RNA5SP471-201ENST00000516971 106 ntBASIC3.07□□□□□ -1.92
PCDH9Q9HC56 RN7SKP272-201ENST00000516988 232 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms