Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1BQ9H9Y6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
POLR1BQ9H9Y6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
POLR1BQ9H9Y6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 NACAP2-201ENST00000318548 624 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 CISD1P1-201ENST00000393907 327 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AL031121.1-201ENST00000406553 254 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 RNU2-9P-201ENST00000410194 145 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 RNU2-29P-201ENST00000410423 189 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 RNU4-46P-201ENST00000410818 138 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 OR6C66P-201ENST00000414917 930 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC091179.1-201ENST00000461606 579 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC128713.1-201ENST00000471495 306 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC233702.1-201ENST00000482905 502 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC117522.3-201ENST00000507974 584 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 RBBP4P6-201ENST00000508098 202 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC022880.1-201ENST00000534017 973 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 MIR4672-201ENST00000583126 81 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC008945.2-201ENST00000606056 604 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AC116312.1-201ENST00000606841 314 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 SNORD39.4-201ENST00000620099 78 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 MTND4P35-201ENST00000604257 1375 ntBASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1BQ9H9Y6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AL139276.1-201ENST00000311910 1001 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 SNORA7.4-201ENST00000384249 137 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-301P-201ENST00000384277 107 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 BMS1P22-201ENST00000414726 313 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC245054.2-201ENST00000415639 319 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 SKA2P1-201ENST00000425592 390 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC098614.2-201ENST00000426040 255 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 CST9LP2-201ENST00000437612 320 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC098831.1-201ENST00000440661 216 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC104058.1-201ENST00000448028 297 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC027673.1-201ENST00000456245 405 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 RNU7-63P-201ENST00000459054 62 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 RPL36AP51-201ENST00000487216 318 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 RPS27AP10-201ENST00000496103 208 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC008885.1-201ENST00000514930 301 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-506P-201ENST00000516553 94 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC022634.1-201ENST00000520765 532 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AL512310.1-201ENST00000548639 172 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 ZNF519P2-201ENST00000557032 169 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC007938.3-201ENST00000604965 623 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AL670379.4-201ENST00000605279 254 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC024940.5-201ENST00000622889 474 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 ELF2P3-201ENST00000445099 1506 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 AC110491.1-201ENST00000562191 2010 ntBASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1BQ9H9Y6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
POLR1BQ9H9Y6 Y_RNA.41-201ENST00000362646 102 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms