Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CDK8P2-201ENST00000415020 547 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC007560.1-201ENST00000426912 237 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 RPS15AP7-201ENST00000439294 405 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 DPPA3P1-201ENST00000448050 469 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 GSTA11P-201ENST00000452866 669 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 MTATP6P7-201ENST00000453315 681 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AL049873.1-201ENST00000480540 376 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 RN7SKP298-201ENST00000515950 94 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 RNU6-572P-201ENST00000516724 80 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 RNU6-445P-201ENST00000516949 107 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 OR5AL2P-201ENST00000532185 920 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AL391840.1-201ENST00000571144 367 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC091834.1-201ENST00000614543 472 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC024940.5-201ENST00000622889 474 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 AC093648.1-201ENST00000623546 606 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 CKAP2P1-201ENST00000555477 2049 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 Y_RNA.33-201ENST00000362591 102 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 RNU6-1097P-201ENST00000363586 107 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SNORA68.1-201ENST00000364537 132 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 RNU6-61P-201ENST00000365528 109 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SET-203ENST00000372688 801 ntTSL 2 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 MIR1-2-201ENST00000384961 85 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 MIR634-201ENST00000385208 97 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 U3.26-201ENST00000391236 204 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL356057.2-201ENST00000403318 432 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL590004.2-201ENST00000404787 371 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SNORD88.1-201ENST00000408684 91 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL365338.1-201ENST00000422282 858 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 C1DP4-201ENST00000455429 424 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AP001486.1-201ENST00000463339 476 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 HIGD1AP13-201ENST00000509878 289 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SCGB1D5P-201ENST00000515134 247 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 RNA5SP76-201ENST00000516277 87 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SCARNA13-201ENST00000516672 275 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 RNU6-703P-201ENST00000516946 107 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 RNU6-1183P-201ENST00000517054 60 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 MTCO2P4-201ENST00000517968 247 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AC009902.1-201ENST00000519351 183 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL157871.3-201ENST00000557231 293 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 MIR4782-201ENST00000577987 79 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 MIR1273C-201ENST00000578669 77 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 NRBF2P5-201ENST00000603087 788 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL589743.7-201ENST00000612637 233 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AC005332.10-201ENST00000612725 619 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AC048344.4-201ENST00000619744 527 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AC099842.1-201ENST00000619919 596 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 U6.114-201ENST00000636407 96 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 MIR7515-201ENST00000637837 67 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 ASNSP3-201ENST00000451989 1306 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
UBQLN3Q9H347 AC103710.2-202ENST00000641454 2853 ntBASIC2.63□□□□□ -1.99
UBQLN3Q9H347 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
UBQLN3Q9H347 SNORA62.1-201ENST00000364287 154 ntBASIC2.62□□□□□ -1.99
UBQLN3Q9H347 Y_RNA.367-201ENST00000365544 101 ntBASIC2.62□□□□□ -1.99
UBQLN3Q9H347 RNU6-108P-201ENST00000365558 107 ntBASIC2.62□□□□□ -1.99
UBQLN3Q9H347 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
UBQLN3Q9H347 RNU6-750P-201ENST00000390946 107 ntBASIC2.62□□□□□ -1.99
UBQLN3Q9H347 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.62□□□□□ -1.99
UBQLN3Q9H347 AL512633.1-201ENST00000399931 655 ntBASIC2.62□□□□□ -1.99
UBQLN3Q9H347 BTF3L4P1-201ENST00000413813 468 ntBASIC2.62□□□□□ -1.99
UBQLN3Q9H347 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.62□□□□□ -1.99
UBQLN3Q9H347 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms