Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 PTMAP5-201ENST00000393073 333 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 Y_RNA.621-201ENST00000411065 96 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 AL513477.1-202ENST00000417061 214 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 RPL36AP48-201ENST00000485521 314 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 SNORD36C-201ENST00000516733 66 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 IGKV3D-34-201ENST00000522638 302 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 AC078899.2-201ENST00000595282 212 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 MFSD8-239ENST00000641590 2479 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 AL355596.1-201ENST00000565399 3996 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 RNA5SP510-201ENST00000364697 99 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 AL445685.2-201ENST00000422551 342 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 REG1CP-206ENST00000447469 496 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 RNU6-221P-201ENST00000459541 99 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 RNA5SP271-201ENST00000516700 88 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 SNORA18.7-201ENST00000516910 131 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 Y_RNA.722-201ENST00000517279 114 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 ZNF271P-202ENST00000465539 1970 ntBASIC6.62□□□□□ -1.35
RNF39Q9H2S5 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF39Q9H2S5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 AC026241.1-201ENST00000517873 2142 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 SNORD115-28-201ENST00000363931 81 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 RN7SKP186-201ENST00000365371 303 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 Y_RNA.532-201ENST00000384590 113 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 SDHCP2-201ENST00000398565 501 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 RN7SL221P-201ENST00000466190 281 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 RN7SL269P-201ENST00000467795 305 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 SNORD46.2-201ENST00000516021 102 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 RNU6-977P-201ENST00000516411 103 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 ACA59.2-201ENST00000517061 156 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 RN7SKP234-201ENST00000517173 224 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 IGHV1-14-201ENST00000523391 241 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 AC008521.2-201ENST00000591021 259 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 RPL17P51-201ENST00000605218 238 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 AP000866.6-201ENST00000638898 3579 ntBASIC6.61□□□□□ -1.35
RNF39Q9H2S5 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF39Q9H2S5 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 AL159987.1-201ENST00000347911 293 ntBASIC6.6□□□□□ -1.35
RNF39Q9H2S5 SNORD38.1-201ENST00000363863 68 ntBASIC6.6□□□□□ -1.35
RNF39Q9H2S5 MIR154-201ENST00000385243 84 ntBASIC6.6□□□□□ -1.35
RNF39Q9H2S5 KRTAP19-11P-201ENST00000439851 104 ntBASIC6.6□□□□□ -1.35
RNF39Q9H2S5 RPS29P21-201ENST00000496272 170 ntBASIC6.6□□□□□ -1.35
RNF39Q9H2S5 Y_RNA.660-201ENST00000516002 120 ntBASIC6.6□□□□□ -1.35
RNF39Q9H2S5 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 FTX_3.1-201ENST00000610451 147 ntBASIC6.6□□□□□ -1.35
RNF39Q9H2S5 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.6□□□□□ -1.35
RNF39Q9H2S5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF39Q9H2S5 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms