Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU2-43P-201ENST00000410306 190 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.623-201ENST00000411128 95 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 RNU5E-9P-201ENST00000411164 104 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AL117339.3-201ENST00000418733 162 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AC016712.1-201ENST00000431088 378 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AL049745.1-201ENST00000433953 286 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AL162725.1-201ENST00000435405 301 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AC005002.2-201ENST00000438228 269 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 H2AFZP5-201ENST00000446960 382 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AURKAPS2-201ENST00000454983 333 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AC010683.1-201ENST00000473673 378 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-1095P-201ENST00000516148 108 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-1315P-201ENST00000517187 99 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AC103996.1-201ENST00000555468 102 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 AC090617.3-201ENST00000573670 475 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 MIR4308-201ENST00000580634 81 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 FAM27B-201ENST00000610601 213 ntBASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NUCKS1Q9H1E3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AC139769.1-204ENST00000472297 1931 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-384P-201ENST00000364900 104 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-215P-201ENST00000365169 102 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 RNA5SP87-201ENST00000384155 118 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.569-201ENST00000384749 103 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.580-201ENST00000391004 95 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 RNA5SP56-201ENST00000410277 118 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 MTCO1P39-201ENST00000426148 480 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 RPL21P40-201ENST00000428586 483 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 RPS6P12-201ENST00000432491 726 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 RPS20P1-201ENST00000434853 354 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 HSPD1P21-201ENST00000436541 245 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AC006466.1-201ENST00000438721 289 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AL772161.1-201ENST00000439130 476 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 RPS26P21-201ENST00000475397 348 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 APOOP4-201ENST00000513530 597 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AC008489.1-201ENST00000524271 483 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 MIR4737-201ENST00000583979 81 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AC091178.1-203ENST00000584586 279 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 AL391358.1-201ENST00000605342 190 ntBASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.05□□□□□ -1.6
NUCKS1Q9H1E3 MAPK10-263ENST00000641052 4307 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 ZNF826P-207ENST00000622273 1910 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 SNORA25.1-201ENST00000362326 128 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 RNU4-30P-201ENST00000410245 143 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 EIF4A1P11-201ENST00000451239 222 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AC079168.2-201ENST00000453977 416 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 RPS29P27-201ENST00000463711 170 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AC091868.1-201ENST00000508746 304 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 RNA5SP446-201ENST00000515955 82 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AL157871.3-201ENST00000557231 293 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 MIR1273C-201ENST00000578669 77 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 MIR3667-201ENST00000581025 74 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AC015813.4-201ENST00000610469 179 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AC008785.1-201ENST00000624475 456 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AL451142.2-201ENST00000429076 2090 ntBASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.04□□□□□ -1.6
NUCKS1Q9H1E3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 MIR448-201ENST00000362131 111 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms