Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC012435.1-202ENST00000568772 240 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 AC012213.3-201ENST00000577199 777 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 AC090616.2-202ENST00000584248 222 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 AL033523.1-201ENST00000605153 153 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 MIR15A-201ENST00000607334 83 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 AC130324.3-201ENST00000614165 542 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 AL355493.4-201ENST00000618530 292 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 AP003485.2-201ENST00000623636 610 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 AC017037.3-201ENST00000625016 472 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 MIR6733-201ENST00000635723 61 ntBASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4AQ9BY43 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 RPL9P7-201ENST00000330965 580 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 RNA5SP125-201ENST00000364843 120 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 RNU1-100P-201ENST00000365255 165 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 RNU6-898P-201ENST00000365627 104 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 MIR34A-201ENST00000385130 110 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AL593851.1-201ENST00000426171 157 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 MYL8P-204ENST00000431574 518 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 USP9YP12-201ENST00000450481 570 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AC118465.1-201ENST00000513820 1271 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 RNA5SP356-201ENST00000515972 94 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 ZNF321P-202ENST00000550843 495 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 MIR5697-201ENST00000578045 78 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AL353778.1-201ENST00000603149 408 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AC112191.3-201ENST00000604371 277 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AC108479.2-201ENST00000617314 601 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AC009159.2-201ENST00000617603 606 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 U6.42-201ENST00000618440 107 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AC008121.3-201ENST00000618726 433 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 AC006020.1-201ENST00000420179 1854 ntBASIC3.53□□□□□ -1.84
CHMP4AQ9BY43 Z82195.2-201ENST00000612348 18351 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 RNU5E-5P-201ENST00000365379 116 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 BMS1P22-201ENST00000414726 313 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AL627311.1-201ENST00000431514 115 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 IPO7P1-201ENST00000442031 636 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 RPL21P41-201ENST00000459863 264 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 DYNLL1P5-201ENST00000467158 270 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC010587.1-201ENST00000505809 469 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC096725.1-201ENST00000514266 313 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC109329.1-201ENST00000518744 317 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AP003467.2-201ENST00000520175 319 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 MIR3162-201ENST00000581818 82 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC012360.2-201ENST00000609349 391 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC104010.1-201ENST00000616889 150 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC131159.1-201ENST00000621854 213 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AC008993.2-201ENST00000631744 806 ntBASIC3.52□□□□□ -1.85
CHMP4AQ9BY43 AL365361.1-201ENST00000566942 3481 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 SNORA4.3-201ENST00000365564 137 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 ELOCP4-201ENST00000420090 333 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AC093106.2-201ENST00000428212 385 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 FABP5P13-201ENST00000452144 328 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 RPS3AP22-201ENST00000488297 769 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AC005178.1-201ENST00000508392 440 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AC117522.1-201ENST00000509821 380 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 RNU6-1129P-201ENST00000515964 104 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 Y_RNA.689-201ENST00000516589 107 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AP004607.1-201ENST00000524456 203 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AF131215.7-201ENST00000602443 707 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AL138963.2-201ENST00000605137 226 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AC024940.5-201ENST00000622889 474 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 SCARNA4-202ENST00000625402 129 ntBASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP4AQ9BY43 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms