Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC040168.1-201ENST00000623594 991 ntBASIC1.03□□□□□ -2.24
SCAPERQ9BY12 RBBP8P1-201ENST00000449447 1844 ntBASIC1.03□□□□□ -2.25
SCAPERQ9BY12 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SCAPERQ9BY12 RNU6-492P-201ENST00000363035 104 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 SNORA8-201ENST00000384574 139 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 MIR218-1-201ENST00000384999 110 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 TAF9BP2-201ENST00000400856 499 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.02□□□□□ -2.25
SCAPERQ9BY12 TOMM22P2-201ENST00000430735 237 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 RPS20P24-201ENST00000457473 361 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.02□□□□□ -2.25
SCAPERQ9BY12 RNU6-488P-201ENST00000515918 99 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 RNU6-496P-201ENST00000516145 99 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 RNA5SP137-201ENST00000516833 135 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 BNIP3P25-201ENST00000596023 559 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 AC009229.3-201ENST00000608056 282 ntBASIC1.02□□□□□ -2.25
SCAPERQ9BY12 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SCAPERQ9BY12 U3.13-201ENST00000364804 214 ntBASIC1.01□□□□□ -2.25
SCAPERQ9BY12 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.01□□□□□ -2.25
SCAPERQ9BY12 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.01□□□□□ -2.25
SCAPERQ9BY12 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.01□□□□□ -2.25
SCAPERQ9BY12 AC103851.1-201ENST00000506833 274 ntBASIC1.01□□□□□ -2.25
SCAPERQ9BY12 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.01□□□□□ -2.25
SCAPERQ9BY12 AC114786.4-201ENST00000508771 728 ntBASIC1.01□□□□□ -2.25
SCAPERQ9BY12 AC114797.1-201ENST00000514003 728 ntBASIC1.01□□□□□ -2.25
SCAPERQ9BY12 AC025857.1-201ENST00000525252 377 ntBASIC1.01□□□□□ -2.25
SCAPERQ9BY12 C1DP5-201ENST00000525775 383 ntBASIC1.01□□□□□ -2.25
SCAPERQ9BY12 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.01□□□□□ -2.25
SCAPERQ9BY12 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.01□□□□□ -2.25
SCAPERQ9BY12 MIR4713-201ENST00000582691 75 ntBASIC1.01□□□□□ -2.25
SCAPERQ9BY12 GAS5-AS1-201ENST00000602767 694 ntBASIC1.01□□□□□ -2.25
SCAPERQ9BY12 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.01□□□□□ -2.25
SCAPERQ9BY12 SNORD26-201ENST00000384147 75 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AL356421.1-201ENST00000403255 413 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AC023141.4-201ENST00000412031 328 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AF213884.2-201ENST00000510417 903 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 SNORD116-30-201ENST00000516468 85 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1□□□□□ -2.25
SCAPERQ9BY12 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1□□□□□ -2.25
SCAPERQ9BY12 MIR3198-2-201ENST00000577868 80 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AL031775.1-201ENST00000607014 887 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AC103810.8-201ENST00000607347 118 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AC069294.1-201ENST00000608397 350 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AC090970.3-201ENST00000612566 866 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AC243829.3-201ENST00000622177 108 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 AC022513.1-201ENST00000624512 117 ntBASIC1□□□□□ -2.25
SCAPERQ9BY12 MIR618-201ENST00000385287 98 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.99□□□□□ -2.25
SCAPERQ9BY12 AC092628.1-201ENST00000436250 252 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.99□□□□□ -2.25
SCAPERQ9BY12 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.99□□□□□ -2.25
SCAPERQ9BY12 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.99□□□□□ -2.25
SCAPERQ9BY12 FAM206BP-201ENST00000510179 541 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.99□□□□□ -2.25
SCAPERQ9BY12 AP003497.1-201ENST00000528472 562 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 AC008121.1-201ENST00000603244 268 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 AL360085.1-201ENST00000604713 532 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 AC090132.2-201ENST00000615881 347 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 ELL2P3-201ENST00000457883 1602 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.99□□□□□ -2.25
SCAPERQ9BY12 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SCAPERQ9BY12 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
SCAPERQ9BY12 Y_RNA.85-201ENST00000363014 111 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 RNU6-441P-201ENST00000384545 106 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC098934.3-201ENST00000430450 190 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AL512844.2-201ENST00000433990 593 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.98□□□□□ -2.25
SCAPERQ9BY12 MTND6P13-201ENST00000443510 523 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 DDX3P2-201ENST00000446138 111 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.98□□□□□ -2.25
SCAPERQ9BY12 HAUS1P3-201ENST00000523909 662 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC016925.2-201ENST00000605108 242 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 MIR2909-201ENST00000617113 69 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 RNU6-1155P-201ENST00000363554 107 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC018630.2-202ENST00000422992 927 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 TAAR7P-201ENST00000436141 242 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC092393.1-201ENST00000439625 742 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AL592447.1-201ENST00000447592 540 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AL096803.2-201ENST00000450032 677 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC117525.1-201ENST00000515228 503 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC107953.1-201ENST00000522216 297 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC022254.1-201ENST00000567857 235 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.98□□□□□ -2.25
SCAPERQ9BY12 HMGN2P15-201ENST00000585707 270 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AP001269.3-201ENST00000588718 329 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AL137246.1-201ENST00000607072 977 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 AC104763.3-201ENST00000613765 618 ntBASIC0.98□□□□□ -2.25
SCAPERQ9BY12 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SCAPERQ9BY12 MIR146A-201ENST00000385201 99 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 MIR325-201ENST00000385260 98 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 RNU6-750P-201ENST00000390946 107 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 PIGPP2-201ENST00000411569 458 ntBASIC0.97□□□□□ -2.25
SCAPERQ9BY12 AC092047.1-201ENST00000424997 240 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms