Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC105137.2-201ENST00000569073 466 ntBASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 MIR3913-1-201ENST00000577744 102 ntBASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 MIR4658-201ENST00000584344 65 ntBASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 AP001429.1-201ENST00000602568 530 ntBASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 AC098826.3-201ENST00000603823 466 ntBASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 AC112204.3-201ENST00000623822 332 ntBASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.03□□□□□ -2.08
RSPO3Q9BXY4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.03□□□□□ -2.09
RSPO3Q9BXY4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
RSPO3Q9BXY4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 Y_RNA.41-201ENST00000362646 102 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 U8.3-201ENST00000363321 132 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 Y_RNA.559-201ENST00000384686 107 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 MIR19A-201ENST00000384878 82 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 MIR524-201ENST00000385242 87 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 U3.20-201ENST00000390909 217 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 RPS3AP3-201ENST00000411933 242 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 Z98742.3-201ENST00000418637 326 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 BEND7P1-201ENST00000422058 457 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 HMGB3P12-201ENST00000438745 556 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL445687.1-201ENST00000439946 251 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 MTND6P13-201ENST00000443510 523 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 RAC1P7-201ENST00000445367 377 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 TPT1P14-201ENST00000448018 505 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 GAPDHP17-201ENST00000449858 1001 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 SSXP1-201ENST00000453640 473 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 LARP1BP2-201ENST00000486594 519 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC112204.1-201ENST00000502591 103 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC022616.6-201ENST00000520479 119 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 MTCYBP20-201ENST00000524239 1129 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 RPL21P5-201ENST00000554662 472 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AMZ2P1-203ENST00000565833 850 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 BNIP3P8-201ENST00000597863 560 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 SEPT7P9-203ENST00000604116 343 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL031176.1-201ENST00000604554 466 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL158211.4-201ENST00000606988 584 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 OR10AB1P-201ENST00000609613 938 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 Z99129.1-201ENST00000612510 255 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL161629.2-201ENST00000615347 275 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC245884.12-201ENST00000615364 59 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 AC091953.2-201ENST00000623979 160 ntBASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RSPO3Q9BXY4 SDAD1P2-201ENST00000441308 2028 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AC009812.4-201ENST00000569134 1805 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 RNU5E-8P-201ENST00000363502 116 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 RNU6-195P-201ENST00000411352 109 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AL513331.1-201ENST00000411908 397 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 MTCO3P41-201ENST00000414801 328 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AL353777.1-201ENST00000425552 326 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AC009961.2-201ENST00000435771 251 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AL121871.1-201ENST00000443413 436 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AC244505.5-201ENST00000443639 207 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AP1S2P1-201ENST00000457344 379 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 RPL31P41-201ENST00000477967 372 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AL135752.1-201ENST00000479477 471 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 MTND1P3-201ENST00000484956 952 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 RPS27P26-201ENST00000494583 239 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 NDUFB4P2-201ENST00000509515 391 ntBASIC2.01□□□□□ -2.09
RSPO3Q9BXY4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms