Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 USP9YP10-201ENST00000454868 628 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 BX322784.1-201ENST00000455793 1077 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 HMGN2P23-201ENST00000456759 269 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AMD1P1-201ENST00000457220 922 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AL441985.1-201ENST00000457727 251 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC114981.1-201ENST00000503897 678 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 RNU1-92P-201ENST00000517017 135 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 CYB5AP5-201ENST00000549779 389 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AL121821.2-201ENST00000556081 394 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AL139344.1-201ENST00000605228 195 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC116312.1-201ENST00000606841 314 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AL357080.1-201ENST00000617394 239 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC010975.3-201ENST00000618727 978 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AC084824.4-201ENST00000620106 731 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AL118508.4-201ENST00000624142 1176 ntBASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
LIMD2Q9BT23 AP000776.1-201ENST00000530032 1663 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 NACAP2-201ENST00000318548 624 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 RNU5E-1-201ENST00000362477 120 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 Y_RNA.25-201ENST00000362528 102 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 Y_RNA.234-201ENST00000364409 97 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 MIR320A-201ENST00000385302 82 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 SNRPEP2-201ENST00000397592 279 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 DHFRP6-201ENST00000401776 268 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AL590084.1-201ENST00000407885 387 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 TAF13P2-201ENST00000416876 286 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 ISCA1P1-201ENST00000426679 387 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 MTND4LP7-201ENST00000431728 294 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 MTCYBP35-201ENST00000503630 1137 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 FAM92A1P2-202ENST00000504766 877 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 YWHAEP4-201ENST00000505390 198 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 RNU5B-3P-201ENST00000516601 115 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 RNU6-714P-201ENST00000516963 103 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 OR5B19P-201ENST00000531766 928 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 PSMA3P-201ENST00000555485 635 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 MIR3945-201ENST00000581853 98 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AC103987.3-201ENST00000582071 292 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 ELOCP5-201ENST00000604924 333 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 TUG1_2.1-201ENST00000614234 87 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 AC019226.1-201ENST00000625666 515 ntBASIC0.85□□□□□ -2.27
LIMD2Q9BT23 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
LIMD2Q9BT23 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 U8.1-201ENST00000362843 134 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 RNU6-203P-201ENST00000384038 104 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 RNU6-481P-201ENST00000384194 107 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AL591034.2-201ENST00000402839 359 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 MIR1302-8-201ENST00000408342 128 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 RNU2-48P-201ENST00000410694 191 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 RNU4-27P-201ENST00000410889 139 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AL354695.1-201ENST00000427935 228 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 HMGB1P27-201ENST00000431429 603 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 USP9YP22-201ENST00000438971 294 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 FABP5P15-201ENST00000453566 214 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 snoU13.8-201ENST00000458890 104 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AC006512.1-201ENST00000468816 291 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 RPL7P43-201ENST00000478876 753 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AC110760.3-202ENST00000515177 371 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AC006518.2-201ENST00000542513 940 ntBASIC0.84□□□□□ -2.27
LIMD2Q9BT23 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.84□□□□□ -2.27
LIMD2Q9BT23 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms