Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC000111.3-201ENST00000433478 193 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AL360271.2-201ENST00000447710 161 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC026241.1-201ENST00000517873 2142 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC068657.1-201ENST00000520807 306 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AP003034.1-201ENST00000534621 422 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC091152.3-201ENST00000604227 325 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC012557.2-201ENST00000605919 418 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC015540.1-201ENST00000615828 501 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 AC139792.3-201ENST00000623525 224 ntBASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
HERPUD2Q9BSE4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 RNA5SP387-201ENST00000364226 106 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 RNU6-517P-201ENST00000384362 110 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 U3.26-201ENST00000391236 204 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC068050.1-201ENST00000394891 380 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 Z99127.3-201ENST00000448158 395 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC092436.1-201ENST00000506450 503 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 COX6CP5-201ENST00000527162 228 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC106782.4-201ENST00000568264 210 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC103810.1-201ENST00000579873 453 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 MIR4276-201ENST00000584832 70 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC008752.3-201ENST00000588113 712 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AL354950.2-201ENST00000617939 290 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC091903.1-201ENST00000624322 454 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AC073346.2-201ENST00000624724 2058 ntBASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
HERPUD2Q9BSE4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 U3.6-201ENST00000363622 211 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 SNORA68.1-201ENST00000364537 132 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 RNU6-996P-201ENST00000365438 107 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 RNU6-45P-201ENST00000384471 107 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 MIR518D-201ENST00000385014 87 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 MTND1P1-201ENST00000445453 368 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AL118520.1-201ENST00000450770 291 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 SNRPFP3-201ENST00000457792 225 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 SRRM1P2-201ENST00000464531 1192 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 RN7SL807P-201ENST00000470923 297 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC107626.1-201ENST00000471084 183 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 RPL9P6-201ENST00000492764 598 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 RNU6-56P-201ENST00000516986 93 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 SNORA31.26-201ENST00000517250 137 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC037471.2-201ENST00000564941 598 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 MTATP6P3-201ENST00000581686 676 ntBASIC3.34□□□□□ -1.87
HERPUD2Q9BSE4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms