Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MIR7851-201ENST00000610611 160 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC104237.2-201ENST00000612456 443 ntBASIC2.54□□□□□ -2
VGLL1Q99990 MIR6798-201ENST00000612887 67 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC034102.8-201ENST00000615146 484 ntBASIC2.54□□□□□ -2
VGLL1Q99990 FAM157A-202ENST00000615155 405 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AL359547.2-201ENST00000615810 418 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC090132.2-201ENST00000615881 347 ntBASIC2.54□□□□□ -2
VGLL1Q99990 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.54□□□□□ -2
VGLL1Q99990 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.54□□□□□ -2
VGLL1Q99990 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VGLL1Q99990 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VGLL1Q99990 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 AL356274.2-201ENST00000624379 3752 ntBASIC2.54□□□□□ -2
VGLL1Q99990 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VGLL1Q99990 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 OR4G2P-202ENST00000641004 1759 ntBASIC2.54□□□□□ -2
VGLL1Q99990 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
VGLL1Q99990 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.53□□□□□ -2
VGLL1Q99990 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.53□□□□□ -2
VGLL1Q99990 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.53□□□□□ -2
VGLL1Q99990 DEFB108F-201ENST00000344638 222 ntBASIC2.53□□□□□ -2
VGLL1Q99990 Y_RNA.67-201ENST00000362870 100 ntBASIC2.53□□□□□ -2
VGLL1Q99990 RNU6-254P-201ENST00000363377 107 ntBASIC2.53□□□□□ -2
VGLL1Q99990 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
VGLL1Q99990 Y_RNA.419-201ENST00000384041 102 ntBASIC2.53□□□□□ -2
VGLL1Q99990 RNU6-1011P-201ENST00000384668 107 ntBASIC2.53□□□□□ -2
VGLL1Q99990 MIR887-201ENST00000401258 79 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AL139039.1-201ENST00000401900 692 ntBASIC2.53□□□□□ -2
VGLL1Q99990 RN7SKP202-201ENST00000410439 330 ntBASIC2.53□□□□□ -2
VGLL1Q99990 RNU4-14P-201ENST00000410858 122 ntBASIC2.53□□□□□ -2
VGLL1Q99990 RNA5SP344-201ENST00000411081 104 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AL513331.1-201ENST00000411908 397 ntBASIC2.53□□□□□ -2
VGLL1Q99990 BMS1P22-201ENST00000414726 313 ntBASIC2.53□□□□□ -2
VGLL1Q99990 Z85995.1-201ENST00000415547 335 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AC016831.2-201ENST00000417179 352 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.53□□□□□ -2
VGLL1Q99990 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.53□□□□□ -2
VGLL1Q99990 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.53□□□□□ -2
VGLL1Q99990 AL591704.1-201ENST00000432574 275 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AL591212.2-201ENST00000433923 257 ntBASIC2.53□□□□□ -2
VGLL1Q99990 NDUFA5P4-201ENST00000436704 385 ntBASIC2.53□□□□□ -2
VGLL1Q99990 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.53□□□□□ -2
VGLL1Q99990 AC087588.1-201ENST00000462203 316 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AC087884.1-201ENST00000469738 328 ntBASIC2.53□□□□□ -2
VGLL1Q99990 MTND4P17-201ENST00000470444 350 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AC006483.1-201ENST00000487308 313 ntBASIC2.53□□□□□ -2
VGLL1Q99990 SUMO2P6-201ENST00000505273 288 ntBASIC2.53□□□□□ -2
VGLL1Q99990 MLLT10P2-201ENST00000506434 249 ntBASIC2.53□□□□□ -2
VGLL1Q99990 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.53□□□□□ -2
VGLL1Q99990 APOOP4-201ENST00000513530 597 ntBASIC2.53□□□□□ -2
VGLL1Q99990 RNU6-189P-201ENST00000516120 101 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.53□□□□□ -2
VGLL1Q99990 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.53□□□□□ -2
VGLL1Q99990 AP000889.2-201ENST00000532684 490 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AC007536.1-201ENST00000533382 349 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.53□□□□□ -2
VGLL1Q99990 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.53□□□□□ -2
VGLL1Q99990 AC093227.2-201ENST00000589357 285 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AC006557.5-201ENST00000603126 811 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AL158032.1-201ENST00000605401 106 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AC016727.1-205ENST00000605437 569 ntBASIC2.53□□□□□ -2
VGLL1Q99990 AL022345.1-201ENST00000607292 135 ntBASIC2.53□□□□□ -2
VGLL1Q99990 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VGLL1Q99990 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.53□□□□□ -2
VGLL1Q99990 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.53□□□□□ -2
VGLL1Q99990 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
VGLL1Q99990 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.53□□□□□ -2
VGLL1Q99990 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.53□□□□□ -2
VGLL1Q99990 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
VGLL1Q99990 AP001350.1-201ENST00000601906 1524 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VGLL1Q99990 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.52□□□□□ -2.01
VGLL1Q99990 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VGLL1Q99990 RNU5A-1-201ENST00000362698 116 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 RNU6-1252P-201ENST00000363054 104 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 RNA5SP479-201ENST00000364858 117 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 AL359837.1-201ENST00000381357 287 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 RNU6-393P-201ENST00000384475 107 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 MIR554-201ENST00000384874 96 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 RPL21P3-201ENST00000395517 478 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 RPL21P17-201ENST00000397467 475 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 FAT1P1-201ENST00000406588 507 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 RPL5P18-201ENST00000406671 891 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 MIR548K-201ENST00000408406 116 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 RNA5SP44-201ENST00000410446 133 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 RN7SKP58-201ENST00000411010 305 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 CYCSP19-201ENST00000411715 316 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.52□□□□□ -2.01
VGLL1Q99990 AL354751.2-201ENST00000415471 210 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 NCOR1P3-201ENST00000420479 303 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 AF228730.4-201ENST00000421457 183 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 NDUFB4P7-201ENST00000423198 363 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 AC092017.2-201ENST00000427600 362 ntBASIC2.52□□□□□ -2.01
VGLL1Q99990 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.52□□□□□ -2.01
VGLL1Q99990 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.52□□□□□ -2.01
VGLL1Q99990 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.52□□□□□ -2.01
VGLL1Q99990 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms